Plasmid-based genetic modification of human bone marrow-derived stromal cells: analysis of cell survival and transgene expression after transplantation in rat spinal cord
© Ronsyn et al; licensee BioMed Central Ltd. 2007
Received: 16 May 2007
Accepted: 14 December 2007
Published: 14 December 2007
Bone marrow-derived stromal cells (MSC) are attractive targets for ex vivo cell and gene therapy. In this context, we investigated the feasibility of a plasmid-based strategy for genetic modification of human (h)MSC with enhanced green fluorescent protein (EGFP) and neurotrophin (NT)3. Three genetically modified hMSC lines (EGFP, NT3, NT3-EGFP) were established and used to study cell survival and transgene expression following transplantation in rat spinal cord.
First, we demonstrate long-term survival of transplanted hMSC-EGFP cells in rat spinal cord under, but not without, appropriate immune suppression. Next, we examined the stability of EGFP or NT3 transgene expression following transplantation of hMSC-EGFP, hMSC-NT3 and hMSC-NT3-EGFP in rat spinal cord. While in vivo EGFP mRNA and protein expression by transplanted hMSC-EGFP cells was readily detectable at different time points post-transplantation, in vivo NT3 mRNA expression by hMSC-NT3 cells and in vivo EGFP protein expression by hMSC-NT3-EGFP cells was, respectively, undetectable or declined rapidly between day 1 and 7 post-transplantation. Further investigation revealed that the observed in vivo decline of EGFP protein expression by hMSC-NT3-EGFP cells: (i) was associated with a decrease in transgenic NT3-EGFP mRNA expression as suggested following laser capture micro-dissection analysis of hMSC-NT3-EGFP cell transplants at day 1 and day 7 post-transplantation, (ii) did not occur when hMSC-NT3-EGFP cells were transplanted subcutaneously, and (iii) was reversed upon re-establishment of hMSC-NT3-EGFP cell cultures at 2 weeks post-transplantation. Finally, because we observed a slowly progressing tumour growth following transplantation of all our hMSC cell transplants, we here demonstrate that omitting immune suppressive therapy is sufficient to prevent further tumour growth and to eradicate malignant xenogeneic cell transplants.
In this study, we demonstrate that genetically modified hMSC lines can survive in healthy rat spinal cord over at least 3 weeks by using adequate immune suppression and can serve as vehicles for transgene expression. However, before genetically modified hMSC can potentially be used in a clinical setting to treat spinal cord injuries, more research on standardisation of hMSC culture and genetic modification needs to be done in order to prevent tumour formation and transgene silencing in vivo.
Despite major progress in pharmacological and surgical approaches, a spinal cord injury still remains a very complex medical and psychological challenge, both for patients and their relatives as well as for involved physicians, with currently no existing curative therapy. Next to primary care using surgical osteosynthesis techniques and administration of methylprednisolone , further therapeutic approaches are mainly supportive and are focussed on prevention of secondary complications, like urological problems, decubitus, respiratory tract pathology, etc... However, during the past decade, significant progress has been made in animal models of spinal cord injury [2, 3], and more therapeutic strategies are likely to be discovered as the existence of an endogenous neural regenerative mechanism in the central nerve system is now generally accepted [4, 5]. In this context, a spinal cord injury should not be seen as a single event, but must be recognized as an evolving process with different stages for which different therapeutic approaches can be developed . In general, functional outcome following spinal cord injury will highly depend on the severity of both primary anatomical disruption of nerve tracts (due to contusion, laceration, penetration, etc.) and secondary damage  caused by inevitable inflammatory reactions following the initial trauma. In brief, these secondary inflammatory responses mainly consist of an influx of peripheral inflammatory cells (macrophages, T-cells) and an activation of resident microglia. This inflammatory reaction will finally result in the formation of a central cavitation at the site of the initial trauma in the spinal cord surrounded by glial scar tissue. The latter is an important physical and chemical barrier for endogenous regeneration of ascending and descending nerve tracts and thereby compromises functional outcome. The development of future curative treatments will therefore need to combine multiple approaches that are able to modulate secondary inflammation and to enhance endogenous regeneration.
Currently, a very promising experimental strategy for promoting neuronal survival and endogenous regeneration in injured spinal cord is local delivery of neurotrophic factors. Several neurotrophic factors, like brain-derived neurotrophic factor (BDNF), glial cell-derived neurotrophic factor (GDNF), neurotrophin (NT)3 and nerve growth factor (NGF), can stimulate neurogenesis in vitro and in vivo , and their importance for the development of the nervous system, for axonal pathfinding and neuronal survival has made them promising targets to augment regeneration in the injured brain and spinal cord [9, 10]. Several approaches have been reported to deliver these neurotrophic factors into injured spinal cord: direct injection , adenoviral vectors , osmotic minipumps [13–15], fibrin glue , hydrogels  and genetically modified cell transplants [9, 18–20]. Safety, efficacy and applicability of these reported methodologies highly differ between the above-referenced and other published reports, implying the need for continuous study, improvement and validation of in vivo delivery systems for neurotrophic factors in spinal cord.
In this study, we investigated the feasibility of a plasmid-based strategy for in vitro genetic modification of human bone marrow-derived stromal cells (hMSC) with enhanced green fluorescent protein (EGFP) and NT3. Three genetically modified hMSC lines (EGFP, NT3, NT3-EGFP) were established and used to study cell survival and transgene expression following transplantation in rat spinal cord. First, we present a number of optimised and easy to implement techniques for reproducible histological and molecular detection of hMSC cell transplants in rat spinal cord. Using these techniques we demonstrate that genetically modified hMSC lines can survive in healthy rat spinal cord when using adequate immune suppression and can serve as vehicles for in vivo transgene expression. However, transgene silencing and tumour formation by hMSC cell transplants in vivo are of utmost importance and should therefore be addressed in priority in future research.
In vitro characterisation of genetically modified hMSC cell transplants
Immunological survival of hMSC-EGFP cell transplants in rat spinal cord
Transgene expression of hMSC-NT3 cell transplants in rat spinal cord
Transgene expression of hMSC-NT3-EGFP cell transplants in rat spinal cord
Further investigation of transgene silencing in hMSC-NT3-EGFP cell transplants
Tumorigenicity of hMSC cell transplants in rat spinal cord
Stem cells, both embryonic and adult, are attractive targets in the development of cell and gene therapy approaches in a variety of diseases and injuries. While embryonic stem cells have gained much interest due to their pluripotent differentiation capacity, the potential clinical use of multipotent adult stem cell populations in regenerative medicine seems to be more realistic taking into account certain immunological, practical and ethical advantages. Currently, our research is focussing on the use of adult bone marrow derived stromal cells (MSC) as a cellular minipump for neurotrophic factors in injured spinal cord in order to promote neural regeneration. In this context, the aim of this study was to investigate the feasibility of a plasmid-based strategy for genetic modification of human (h)MSC with enhanced green fluorescent protein (EGFP) and/or neurotrophin (NT)3, and to study in vivo cell survival and transgene expression of genetically modified hMSC following transplantation in rat spinal cord.
In the first part of this study, we investigated survival of hMSC-EGFP cell transplants in rat spinal cord in immune competent and immune suppressed rats. Survival of hMSC-EGFP in normal spinal cord of immune competent rats was significantly compromised from an early time point (day 1 post-transplantation) and resulted in total graft eradication from on week 2 post-transplantation (Figure 2A). However, suppressing the immune system with cyclosporine A resulted in successful long-term in vivo graft survival (Figure 2B). The observed immunological rejection of MSC in the absence of systemic immune suppression is in contrast to a large amount of literature suggesting potential in vivo immune modulation and immune privileged properties of MSC [21–24]. However, we believe that there is a common misunderstanding regarding the immune privileged nature of MSC. While these cells have shown immune suppressive effects on Graft-versus-Host disease when given intravenously as shown in several publications, currently, as also demonstrated by the presented results, there is no strong evidence that these cells are of such an immune tolerant nature that they can be transplanted in allogeneic and xenogeneic hosts without giving proper immune suppression. The latter was recently also suggested by Eliopoulos et al., who clearly demonstrated that mice implanted with MHC-mismatched MSC-expressing murine erythropoietin, in contrast to mice implanted with syngeneic MSC-expressing erythropoietin, failed in causing a sustained rise in hematocrit level. In addition, Swanger et al. demonstrated improved survival of transplanted bone marrow stromal cells in spinal cord when using high-dose cyclosporine A, indicating not only the importance of immune suppression, but also a link between cell survival and level of immune suppression. Therefore, based on these published reports and supported by our findings, we conclude that xenogeneic hMSC cell transplantation in rat is feasible and long-term transplant survival can be achieved under appropriate immune suppression.
In the second part of this study, we investigated the stability of EGFP or NT3 transgene expression by hMSC-EGFP, hMSC-NT3 and hMSC-NT3-EGFP cell transplants in rat spinal cord. While in vivo EGFP expression of transplanted hMSC-EGFP cells was readily detectable at different time points post-transplantation (Figure 2B), in vivo transgene expression by hMSC-NT3 and hMSC-NT3-EGFP cells was, respectively, undetectable (Figure 3) or declined rapidly between day 1 and 7 post-transplantation (Figure 4). In vivo transgene silencing is frequently reported and is currently considered as a major obstacle in the development of ex vivo gene therapy protocols using stem cells. One possible explanation for this transgene silencing might be epigenetic modification of introduced transgenic DNA sequences. Transgene silencing can be initiated and sustained by: (i) methylation of CpG-rich DNA sequences which inhibits RNA transcription, or (ii) deacetylation of histones which allows DNA condensation and makes DNA inaccessible for RNA transcription . In our study, we used an internal ribosome entry site (IRES)-based construct for simultaneous expression of EGFP and NT3 protein starting from a single messenger RNA. Others previously reported similar transgene silencing when using IRES-based constructs, however in vivo transgene silencing could be reversed when animals were treated with 5-azacytidine, a methyltransferase inhibitor . In addition, also deacetylase inhibitors (e.g. trichostatin A and valproic acid) have demonstrated a capacity to prevent transgene silencing in vitro and in vivo [30, 31]. However, in a first trial experiment, neither in vitro treatment of hMSC-NT3-EGFP cells, nor in vivo treatment of cell-transplanted rats, with 5-aza-2-deoxycytidine (a less toxic analogue of 5-azacytidine ), trichostatin A or valproic acid could reverse the observed transgene silencing in vivo in spinal cord (data not shown). Next, further analysis towards a putative explanation for the observed transgene silencing indicated: (i) that transgene silencing did not occur in subcutaneously transplanted hMSC-NT3-EGFP cells (Figure 6), and (ii) that silenced transgene expression was reactivated upon re-establishment of hMSC-NT3-EGFP cultures out of cell-transplanted spinal cords (Figure 7). Based on these observations, we conclude that the observed transgene silencing in our hMSC-NT3-EGFP cell transplants is not due to epigenetic changes, but is most likely due to a natural site-dependent adaptation of transgene expression in vivo. Therefore, in order to use MSC or fibroblast cell transplants as cellular minipumps, genetic modification needs to result in sufficiently high transgene expression able to persist even when cellular activity might be reduced in spinal cord [19, 33].
In the third part of this study, because we observed a slowly progressing tumour growth following transplantation of all our hMSC cell transplants, we investigated whether omitting immune suppressive therapy is sufficient to prevent further tumour growth and to eradicate malignant xenogeneic cell transplants. Despite some tumorigenic characteristics of our hMSC cell transplants (high degree of Ki67-positivity, multiple mitoses, central necrosis, neovascularisation,... (data not shown)), total regression was seen over a 2-week period after cessation of systemic immune suppression. In addition, despite the extent of the resulting inflammatory infiltration in the spinal cord, we did not observe any influence on functional behaviour of the animals (data not shown). Of note, the observed tumour formation was not totally unexpected given the fact that prolonged in vitro stem cell culture might favour growth of MSC clones which potentially can become tumorigenic in vivo as reported by several investigators [34–37]. This in vitro culture-based selection of potentially tumorigenic MSC clones might indeed be a serious problem when aiming transplantation of gene-marked autologous or allogeneic MSC populations under immune suppression, where the immune system will not be able to control tumorigenicity. However, this does not mean that all hMSC cultures will behave this way. Additional experiments that were performed with non-modified early passage hMSC cultures indicated excellent cell survival with no signs of tumour formation upon transplantation into healthy spinal cord (data not shown). The absence of in vivo tumour formation for early passage MSC cultures has also been reported by other investigators [34, 37]. Therefore, based on these and other published reports/reviews about mesenchymal stromal cells  and supported by our findings, we conclude that new techniques need to be developed in order to safely culture and genetically modify hMSC cell transplants for research, and eventually clinical applications.
In this study, we demonstrate that genetically modified hMSC lines can survive in healthy rat spinal cord over at least 3 weeks by using adequate immune suppression and can serve as vehicles for transgene expression. However, before genetically modified hMSC can potentially be used in a clinical setting to treat spinal cord injury, more research on standardisation of hMSC culture and genetic modification needs to be done in order to prevent tumour formation and transgene silencing in vivo.
Human bone marrow-derived stromal cells (hMSC)
Four cryopreserved human bone marrow-derived stromal cell cultures used in a previously published study  were thawed and cultured in complete culture medium (CCM) consisting of Iscove's modified Dulbecco's medium supplemented with 2 mM L-glutamine (IMDM; Cambrex), 100 U/ml penicillin (Invitrogen), 100 mg/ml streptomycin (Invitrogen), 1.25 mg/ml amphotericin B (Invitrogen) and 10% fetal calf serum (FCS; Hyclone). In one out of four cultures, outgrowths of one or more cells lead to the establishment of an immortal bone marrow-derived stromal cell line. This line was (i) analysed by immunostaining and found to be CD166+, CD44+, CD29+, CD73+, CD10+, HLA ABC+ and CD34-, CD45-, MHCII-, CD31-, CD13-, and (ii) analysed by in vitro adipogenic and osteogenic differentiation studies and found to have lost their in vitro differentiation potential. This parental line, designated as "hMSC", was further cultured in CCM in T75 culture flasks (corning) at 37°C in a humidified atmosphere supplemented with 5% CO2. For splitting, cells were harvested once a week using Trypsin/EDTA (Invitrogen) treatment and replated at a concentration of 6 × 103 cells/ml in 20 ml CCM in a new T75 culture flask.
The following DNA plasmids were used in this study for genetic modification of cultured hMSC: (i) the commercially available pEGFP-N1 plasmid encoding the enhanced green fluorescent protein (EGFP) (Clontech), the pCMV-NT3 plasmid encoding the rat neurothrophin-3 (NT3) protein, and (iii) the pIRES2-NT3-EGFP plasmid encoding rat NT3 and EGFP. The pCMV-NT3 plasmid was constructed by replacing the IRES-EGFP sequence from the pIRES2-EGFP plasmid (Clontech) with the rat NT3 cDNA (pAd-EF-NT3 plasmid, kindly provided by Prof. HD Shine, Baylor College of Medicine, Houston, TX, USA) . The pIRES2-NT3-EGFP was constructed by inserting the NT3 cDNA into the multiple cloning site of the pIRES2-EGFP plasmid. After selection of successfully ligated pCMV-NT3 and pIRES2-NT3-EGFP clones via restriction digest mapping, several clones were confirmed by sequence analysis. All plasmids were propagated in E. coli supercompetent cells (Stratagene) and purified using plasmid midiprep columns (Qiagen). Directly before use in electroporation experiments, the plasmids were purified again using a PCR purification kit (Qiagen) and resuspended in DNA/RNA-free H2O at a concentration of 0.3 μg/μl.
Stable genetic modification of hMSC
Stable genetic modification of hMSC following plasmid DNA electroporation was performed by culture under combined antibiotics selection, fluorescence activated cell sorting (FACS) and/or single cell cloning . Briefly, hMSC were harvested, washed twice with CCM, and resuspended at 5 × 106 cells/ml in OptiMem medium (Invitrogen) supplemented with 10% FCS. Next, 500 μl cell suspension was mixed with 10 μg plasmid DNA in a 4 mm electroporation cuvette (Thermo Electron) and electroporation at 260 V and 1050 μF was carried out using a mammalian cell electroporation device (EquiBio). Following electroporation, cells were directly resuspended in CCM and cultured for 48 hours. Next, medium was changed to CCM supplemented with 250 μg/ml neomycin-analogue G418 (Sigma) for 3–4 weeks of selection. Next, in order to establish polyclonal "hMSC-EGFP" and "hMSC-NT3-EGFP" lines, cells highly positive for EGFP (highest 5%) were sorted twice using a FACS-Vantage cell sorter (Becton Dickinson). For establishment of a clonal "hMSC-NT3" line, single clones were grown and screened for NT3 expression by ELISA and RT-PCR (see further). All three lines were further cultured in CCM supplemented with 250 μg/ml G418 in T75 culture flasks at 37°C in a humidified atmosphere supplemented with 5% CO2. For splitting, cell were harvested once a week using trypsin/EDTA treatment and replated at a concentration of 6 × 1003 cells/ml in 20 ml CCM in a new T75 culture flask.
Flow cytometric analysis was used for routine (weekly) and pre-transplant measurement of EGFP transgene expression and cell viability of harvested genetically modified hMSC populations. For this, a sample (0.5 × 106 cells) of harvested cells was resuspended in 1 ml CCM and analysed for EGFP expression on a FACS-scan analytical flow cytometer (Becton Dickinson). Cell viability was measured after addition of 1 μl/ml propidiumiodide (1 mg/ml stock solution, Sigma) to the cell suspension directly before flow cytometric analysis. In some experiments, in order to discriminate hMSC within fibroblast/neural cell cultures derived from dissected spinal cord (see below), cell samples were stained with a phycoerythrin (PE)-labelled monoclonal anti-human CD73 (Becton Dickinson) and a PE-Cy5 labelled monoclonal anti-human CD29 (Becton Dickinson) antibody. For this, cell samples (1 × 106 cells/staining) were washed twice with Phosphate Buffered Saline (PBS) supplemented with 1% FCS, and resuspended in 100 μl PBS + 1% FCS. Next, 1 μg of each antibody was added for 15 min., followed by a washing step with PBS + 1% FCS. Finally, cells were resuspended in 1 ml PBS + 1% FCS and analysed on a FACS-scan analytical flow cytometer.
Secretion of the NT3 neurotrophic factor by hMSC-NT3 and hMSC-NT3-EGFP cells in vitro was determined using the NT3 Emax ImmunoAssay Systems (Promega), according to manufacturers' instructions.
Preparation of cell transplants
Following harvesting of hMSC-EGFP, hMSC-NT3 and hMSC-NT3-EGFP cell populations via trypsin/EDTA treatment, cells were washed twice with (PBS) supplemented with 5% FCS. Next, cells (mean viability of cell populations: 75–90%) were resuspended in PBS + 5% FCS at a concentration of 100 × 106 cells/ml for intraspinal cell transplantation. Cell preparations were kept at room temperature until injection. For subcutaneous transplantation, cells were resuspended in a cooled (1–4°C) Matrigel solution (Becton Dickinson, dilution: 1/2 Matrigel + 1/2 PBS+5%FCS) at a concentration of 100 × 106 cells/ml. Cell preparations were kept on ice until injection.
Female Wistar rats (n = 75, Charles River Laboratories), starting weight 175–200 grams, were divided ad random into different experimental groups. For all experiments, rats were kept in normal day-night cycle (12/12) and got food and water ad libitum. All experimental procedures were approved by the "Ethical Committee for Animal Experiments" of the Antwerp University (approval no. 2004/68).
Intraspinal cell transplantations
All surgical interventions were done under proper sterile conditions. One hour before general induction, rats were premedicated by subcutaneous (SC) injection of buprenorphine (0.1 mg/kg), five minutes before skin incision cefazoline (25 mg/kg) was injected subcutaneously and repeated after 6 hours in order to prevent post-operative infections. Animals were then anaesthetized in an induction chamber with a mixture of O2 and N2O (0.5 l/min/1.0 l/min) and 4.0% isoflurane (Forene, Abbott). During surgery, anaesthesia was maintained by using the same mixture of O2 and N2O (0.5 l/min/1.0 l/min) and 0.75% isoflurane (Forene) by a face mask. After skin incision and spreading of the paraspinal muscles a laminectomy was performed on Th10–Th11, using a 10× Zeiss OpMi1 operation microscope. Afterwards an automatic micro-injector pump (kdScientific) with 10 μl Hamilton Microliter™ Syringe was positioned above the exposed dura. A 33-Gauge Hamilton needle, attached to the syringe was stereotactically placed through the intact dura on midline position on a depth of 1.0 mm. After 2 minutes of pressure equilibration 5 μl cell suspension (containing 5 × 105 cells) was injected over 5 minutes (1 μl/min). Again a waiting period of 2 minutes with the needle still in position in the spinal cord was used for pressure equilibration and prevention of backflow of cell suspension. Muscle and skin was closed with respectively Vicryl (Ethicon) and staplers after proper desinfection of the operation field. Postoperative application of 10 ml glucose 5% solution prevented possible dehydration. During surgery, body temperature was kept on 37% by using a heating path with feedback control by an intrarectal placed sensor. Operated animals recovered by a 5 minutes period of 100% O2 and were placed individually in plastic cages till day 1 postoperative with ad libitum water and food. Skin staplers were removed 6 days post-operative. Daily follow-up was done by measuring weight and assessment of general health status. During the entire experiment, immune mediated rejection of cell transplants was prevented by daily subcutaneous injections of 10 mg/kg cyclosporine A.
Subcutaneous cell transplantations
Subcutaneous injections were done in the interscapular region. After shaving the region of interest, 300 μl of fluid matrigel-cell suspension was injected after which the matrigel immediately coagulated to a palpable subcutaneous tumour. During the entire experiment, immune mediated rejection of cell transplants was prevented by daily subcutaneous injections of 10 mg/kg cyclosporine A.
Spinal cord dissection for molecular and cellular analysis
At different time points post-transplantation, animals were re-anaesthetised as described above. After exposing the cell injection site, an expansion of the previous laminectomy of Th10 was performed to a total of three thoracal levels (e.g. Th 9–10–11). The spinal cord was cut 5 mm cranial and 5 mm caudal from the injection site. This 10 mm section was then extracted and further processed. (i) For standard and real-time PCR/RT-PCR analysis on whole spinal cord sections, the extracted spinal cord sections were preserved in RNAlater (Ambion), as described by the manufacturers' instructions, until further processing (see below). (ii) For gene expression analysis following Laser Capture Micro-dissection (LCM), extracted spinal cord sections were immediately frozen into liquid nitrogen and stored at -80°C until further processing (see below). (iii) For cellular analysis of transplanted cell populations, extracted spinal cord sections were washed in PBS and incubated for 90 min in a 0.1% collagenase (Sigma) solution dissolved in PBS. Next, dissociated cells were plated in CCM in T75 culture flasks. When cultures reached confluence, human cells were stained with antibodies against human CD73 and CD29 and analysed for EGFP expression using a FACS-scan analytical flow cytometer (see above).
Spinal cord dissection for histological analysis
Rats were deeply anaesthetized by intraperitoneal injection of sodium pentobarbital (90 mg/kg) and then perfused transcardially with 150 ml heparinised (1 U/ml) NaCl 0.9%, followed by 300 ml of cold buffered paraformaldehyde 4% (pH 7.4) over a period of 25 min. The spinal cord was than excised from low lumbal towards high cervical level, including the injection site, and immersed for an additional 2 hours in the same fixative.
Subcutaneously placed matrigels were removed under gas anaesthesia and processed for molecular or histological analysis as described above.
Standard and real-time PCR/RT-PCR analysis on cells and whole spinal cord sections
Genetically modified hMSC cell cultures and dissected spinal cord sections were processed for simultaneous DNA and RNA isolation using an AllPrep DNA/RNA Mini Kit (Qiagen), as described by the manufacturers' instructions. Following spectrophotometric quantification, isolated DNA was directly used for further PCR analysis. Isolated RNA was first reverse-transcribed into cDNA for 1 hour using an Omniscript RT kit (Qiagen), as described by manufacturers' instructions. Next, both DNA and cDNA was analysed for the presence of GAPDH, EGFP and NT3 sequences by standard PCR on a Thermocycler Px2 machine (Thermo Cycler) or by real-time PCR on an iCycler Thermal Cycler machine (Biorad). The following primer pairs were used for specific amplification: for GAPDH forward 5'-ACC ACA GTC CAT GCC ATC AC-3' and reverse 5'-TCC ACC ACC CTG TTG CTG TA-3' (this primer pair recognizes both rat and human GAPDH sequences), for EGFP forward 5'-AGA ACG GCA TCA AGG TGA AC-3' and reverse 5'-TGC TCA GGT AGT GGT TGT CG-3', and for NT3 forward 5'-GAT CCA GGC GGA TAT CTT GA-3' and reverse 5'-AAT CAT CGG CTG GAA TTC TG-3' (combination of this primer pair recognizes rat NT3 sequences, not human NT3 sequences; used for results described in Figure 1B) or reverse 5'-CTT ATC ATC GTC ATC CTT GTA GTC-3' (use of the latter primer recognizes a FLAG sequence on transgenic rat NT3 sequences, not on endogenous rat NT3 sequences; used for results described in Figure 1C and Figure 3). Standard PCR reactions were setup using a Taq PCR Core Kit (Qiagen) and real-time PCR reactions were setup in duplicate using a SYBR Green ER qPCR Supermix (Invitrogen), both according to the manufacturers' instructions. Reactions were carried out as follows: after an initial denaturation step at 94°C for 4 min., amplifications consisted of 30 (standard PCR) or 60 (real-time PCR) cycles of denaturation at 95°C for 1 min., annealing at 56°C for 1 min. and extension at 72°C for 1 min. PCR products obtained after standard PCR were analysed in a 1% agarose gel stained with 0.5 μg/ml ethidiumbromide and visualised by UV light. For analysis of real-time PCR data, expression levels of EGFP and NT3 were calculated versus expression of GAPDH.
Gene expression analysis following laser capture micro-dissection (LCM)
Frozen spinal cords were embedded in Neg-50™ (Richard-Allan Scientific) and 8 μm thick sections were cut using a cryomicrotome (Microm HM 500). These sections were then caught on a PEN-membrane, stretched on a metal frame, and instantly fixed with a 70% ethanol solution to inhibit RNA degradation. Next, sections were stained with cresyl-violet (LCM Staining Kit, Ambion) and dried in xylene. During the cutting process, some sections were stained with hematoxylin-eosin to verify the presence of the injected cells. The frames were sandwiched with an RNase-free slide and mounted on the LCM microscope (SL μCut, MMI). Areas with cells of interest in a range from 0.5 mm2 to 1.5 mm2 were selected with a software interface at 400× magnification and cut with a UV-laser. RNA was extracted using the Picopure™ RNA Isolation kit (Arcturus), and the RNA quality was assessed using the Agilent 2100 BioAnalyzer (Agilent Technologies). The overall RNA quality was very good and the calculated yields ranged from 3 – 10 ng of total RNA. RNA was reverse transcribed using the Sensiscript RT Kit (Qiagen). Real-Time PCR was carried out in triplicate on an ABI Prism 7700 Sequence Detection System (Applied Biosystems) using a custom Taqman™ Primers-Probes set for the EGFP gene and a Primers-Probe set for GAPDH as housekeeping gene. Real-time PCR amplification was carried out using following scheme: 2 initial steps of 2 min at 50°C and 10 min at 95°C, then 55 amplification loops with a denaturation of 1 sec at 95°C and an annealing and extention phase of 1 min at 60°C in a reaction volume of 25 μL.
Fixed spinal cord segments and matrigels were dehydrated in sucrose gradients (5%, 10% and 20%), frozen in liquid nitrogen and stored at -80°C until further processing. Consecutive 10 μm-thick longitudinal cryosections were cut using a Microm HM5000 cryostat and stained with hematoxylin-eosin (HE) to locate the transplantation site. Further immunohistochemical analysis were done using either a mouse anti-human mitochondrial antigen (hMA) monoclonal antibody (Chemicon, MAB1273, 1/50 dilution) for human cell identification, a goat anti-EGFP polyclonal antibody (Abcam, AB6673, 1/1200 dilution) to detect EGFP transgene expression by hMSC cell transplants, and a mouse anti-rat CD68 monocyte/macrophage monoclonal antibody (Chemicon, MAB1435, 1/150 dilution) to detect macrophage infiltration into the transplantation site. In brief, slides were rinsed with a commercial washing buffer (DAKO S3006) and endogeneous peroxidase sites were blocked following 30 min incubation with methanol + 1% hydrogen peroxide. Next, slides were washed with water and washing buffer, followed by incubation with normal serum for 1 hour at room temperature (species dependent on the secondary antibody; normal goat serum (Dako, X0907) for staining with MAB1435 and normal rabbit serum (Dako, X0902) for staining with AB6673 and MAB1273). Subsequently slides were incubated overnight at 4°C with the primary antibody. Following this, slides were rinsed with washing buffer and incubated for 1 hour at room temperature either with peroxidase-coupled rabbit anti-goat Ig antibody (Rockland, 605-4302, 1/200 dilution) to detect EGFP, with peroxidase-coupled goat anti-mouse Ig antibody (Rockland, 610-1319, 1/200 dilution) to detect CD68, or with biotin-coupled rabbit anti-mouse Ig (Abcam, ab67271, 1/200 dilution) to detect hMA. For the latter, an extra incubation step with a HRP-coupled streptavidin based detection complex (StreptABComplex, Dako) was required and performed as described in the manufacturers' instructions. Visualisation for all slides was carried out after staining with DAB (Diaminobenzidine, Dako), according to manufacturers instructions, and nuclei were counterstained with hematoxylin carazzi. Fluorescence imaging (standard 2000 ms exposure time) and bright-field immuno-histochemical analysis was done using an Olympus Bx41 microscope equipped with an Olympus DP50 camera. Olympus DP Software was used for image collection and Photoshop for image processing.
This work was supported by research grants 7.0004.03N, WO.012.02.N and G.0132.07 of the Fund for Scientific Research-Flanders (FWO-Vlaanderen, Belgium), by research grants 1081 BOF-KP 2005, 20872 BOF-KP 2006 and 1730 BOF-NOI 2006 from the Antwerp University, and by the Fund for Cell Therapy from the Antwerp University Hospital. Mark Ronsyn holds a PhD fellowship of FWO-Vlaanderen. Gie Spaepen holds a PhD fellowship of the Institute for Science and Technology (IWT). Peter Ponsaerts and Viggo Van Tendeloo are postdoctoral fellows of FWO-Vlaanderen. We also acknowledge helpful assistance from Dirk Van Bockstaele and Marc Lenjou (Laboratory of Experimental Hematology) with flow cytometry and cell sorting, from August Van Laer (Laboratory of Experimental Surgery) with animal handling and surgical procedures, and from Frank Rylant and Gunther Vrolix (Laboratory of Pathology) with histological analysis.
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