- Research article
- Open Access
Generation and functional characterization of the anti-transferrin receptor single-chain antibody-GAL4 (TfRscFv-GAL4) fusion protein
BMC Biotechnologyvolume 12, Article number: 91 (2012)
The development of vectors for cell-specific gene delivery is a major goal of gene therapeutic strategies. Transferrin receptor (TfR) is an endocytic receptor and identified as tumor relative specific due to its overexpression on most tumor cells or tissues, and TfR binds and intakes of transferrin-iron complex. We have previously generated an anti-TfR single-chain variable fragments of immunoglobulin (scFv) which were cloned from hybridoma cell line producing antibody against TfR linked with a 20 aa-long linker sequence (G4S)4. In the present study, the anti-TfR single-chain antibody (TfRscFv) was fused to DNA-binding domain of the yeast transcription factor GAL4. The recombinant fusion protein, designated as TfRscFv-GAL4, is expected to mediate the entry of DNA-protein complex into targeted tumor cells.
Fusion protein TfRscFv-GAL4 was expressed in an E. coli bacterial expression system and was recovered from inclusion bodies with subsequent purification by metal-chelate chromatography. The resulting proteins were predominantly monomeric and, upon refolding, became a soluble biologically active bifunctional protein. In biological assays, the antigen-binding activity of the re-natured protein, TfRscFv-GAL4, was confirmed by specific binding to different cancer cells and tumor tissues. The cell binding rates, as indicated by flow cytometry (FCM) analysis, ranged from 54.11% to 8.23% in seven different human carcinoma cell lines. It showed similar affinity and binding potency as those of parent full-length mouse anti-TfR antibody. The positive binding rates to tumor tissues by tissue microarrays (TMA) assays were 75.32% and 63.25%, but it showed weakly binding with hepatic tissue in 5 cases, and normal tissues such as heart, spleen, adrenal cortex blood vessel and stomach. In addition, the re-natured fusion protein TfRscFv-GAL4 was used in an ELISA with rabbit anti-GAL4 antibody. The GAL4-DNA functional assay through the GAL4 complementary conjugation with the GAL4rec-GFP-pGes plasmid to verify the GLA4 activity and GAL4rec-recognized specificity functions. It also shows the complex, TfRscFv-GAL4-GAL4rec-GFP-pGes, could be taken into endochylema to express the green fluorescent protein (GFP) with 8 to 10-fold transfection efficiency.
Results of our study demonstrated that the biofunctianality of genetically engineered fusion protein, TfRscFv-GAL4, was retained, as the fusion protein could both carry the plasmid of GAL4rec-pGes and bind TfR on tumour cells. This product was able to transfect target cells effectively in an immuno-specific manner, resulting in transient gene expression. This protein that can be applied as an effective therapeutic and diagnostic delivery to the tumor using endogenous membrane transport system with potential widespread utility.
The development of efficient and non-toxic vectors for cell-specific gene delivery is a major challenge in gene therapeutic research. A significant progress has been made in the construction of non-viral vectors that combine different functions required for gene transfer in an artificial complex, as the potential advantages of such a system include ease of use, cost-effective large-scale manufacture, purity, homogeneity, as well as fewer and more well-defined regulatory issues [1, 2]. However, the alternative approaches relying on the activities of natural or recombinant DNA-carrier proteins to achieve uptake and intracellular delivery of plasmid DNA has not been developed.
Transferrin (Tf) plays an important role in the cellular iron uptake. Once Tf binds with transferrin receptor (TfR, CD71) on the cell surface, it is ingested into the endosome under acidic condition. During this process, iron is released and the TfR-apo-Tf complexes then re-circulate into the cell surface. Upon disassociation of TfR, apo-Tf regains the ability of binding to iron again. TfR is a cell membrane-associated glycoprotein involved in the cellular uptake of iron and in the regulation of cell growth  and it is preferentially expressed in cells with high potential for proliferation. Therefore, the remarkable and stable TfR expression can be detected in various tumor cells such as hepatoma carcinoma cells and leukemia cells [4–7]. Given its abundance in malignant tissues and its significance in the cellular iron uptake, TfR could therefore be used as a biomarker for tumor cells in addition to its relevance in cancer and its extracellular accessibility. These characteristics also render TfR to be an excellent antigen for antibody-based cancer therapy . Indeed, many TfR-specific antibodies (mAbs) have been developed and employed to kill the malignant cells in vitro and in vivo [9–11]. Previously, we have successfully developed several antibodies against TfR including the human-mouse chimeric antibody, intracellular antibody and bivalent single chain variable fragment (bsFv) antibody [6, 12–14]. All of these antibodies displayed tumor-specific biodistribution with substantial antitumor activity. We also employed a transferrin-polyethylenimine (Tf–PEI) delivery system to carry HIF-1α shRNAs into distant tumors. Our studies demonstrated that TfR-mediated endocytosis could induce HIF-1α silencing and resulted in impaired xenograft growth of melanoma in vivo . Together, these studies support the possibility that antibodies specific for TfR could be used as a feasible carrier of genes to target for tumor therapy or diagnosis. However, in comparison with the whole antibody or transferin molecule, the scFv has a smaller size for a better penetration into tumor cells. Indeed, low molecule weight single-stranded antibody can be conjugated with various therapeutic or diagnostic molecules to generate targeting complex. Also, the internalized TfR-complex can facilitate the development of tumor therapy or imaging.
The nuclear protein GAL4 is a positive regulator for galactose-induced gene expressions such as GAL1, GAL2, GAL7, GAL10, and MEL1 . The high-affinity of well-characterized of GAL4 DNA-binding has previously been shown to be retained when placed in the context of a heterologous fusion partner or used to enhance gene delivery through conjugation of ligand and other cationic polymers [1, 2, 17]. GAL4 possesses high binding affinity for a specific 17-bp oligonucleotide sequence (5'-cggrnnrcynyncnccg-3', GAL4rec) and acts as a nuclear localization signal (NLS) . Most importantly, its specific DNA-binding domain (DBD) can bind to the plasmid containing an anti-tumor gene or a specific target gene for imaging. These properties make it a good candidate for use as a vehicle for gene transfer.
In the present study, we developed a particularly appealing approach for the delivery of genes through the use of recombinant protein-based vehicles which consists of a DNA-binding motif fused to a cell-binding TfR-scFv. The TfRscFv-GAL4 protein has a dual function: specific DNA binding via GAL4-DBD and the GAL4rec of the DNA plasmid, and intracellular delivery of the target DNA by TfR-scFv transport. This TfRscFv-GAL4 fusion-mediated DNA delivery system effectively transduced the pGFP-plasmid and induced GFP expression in mammalian cells. We further explored its feasibility for application of tumor-targeted drug delivery and in vivo imaging.
Construction of TfRscFv-GAL4pET expression vector, expression, purification and renaturation of TfRscFv-GAL4 fusion protein in E. coli
The plasmid for TfRscFv-GAL4 fusion protein was constructed as described. Sequencing analysis of the inserts matched exactly with the targeted gene sequences in the database (website: http://www.ncbi.nlm.nh.gov/blast). The full-length sequence for the TfRscFv-GAL4 coding region was identical with the NcoI-scFv-EcoRI-GAL4-NotI sequence (Figure 1).
High levels TfRscFv-GAL4 of expression of was induced in pET28/TfRscFv-GAL4 transformed BL21 (DE3) E. coli upon the addition of 1mM IPTG. The optimal induction temperature of 30°C was determined to yield the maximum level of protein expression as shown in Lane 2 of Figure 2A. The majority of the fusion protein (~90%) was found not to be soluble but to be contained within the inclusion bodies. Therefore, the TfRscFv-GAL4 containing the His-tagged was purified from the inclusion bodies as described in “Methods.” As shown in Figure 2B, The TfRscFv-GAL4 fusion protein was then purified from cell lysates under denaturing conditions using the Ni–NTA column and re-natured by urea gradient dialysis. SDS-PAGE showed a single band of the re-folded and purified fusion protein with an approximate molecular weight of 45 ~66.2 kDa, in agreement with the expected molecular weight (46.7 kDa) for the recombinant fusion protein, as well as the highest expression were noted 6h after IPTG induction at 30°C. In contrast, no reactive band was detected in BL21 E. coli transformed with an empty vector (Figure 2B). The concentration of re-natured protein was 1.7 mg/ml as measured by the BCA Protein Assay.
Immunoreactivity of TfRscFv-GAL4 with various tumor cell lines
The binding of TfRscFv-GAL4 to the TfR was studied by flow cytometry using the TfR overexpression on tumor cell lines. We next sought to determine the antigen-binding activity for the TfRscFv-GAL4 fusion protein with various tumor cells. Flow cytometry analysis was employed for this purpose. It was noted that only the TfRscFv-GAL4 group (Figure 3A, TfRscFv-GAL4 group) and the positive controls (Figure 3A, Mouse anti-TfR group) showed positive results by flow cytometry assay, while the negative controls failed to detect any positive cells (Figure 3A, Mouse IgG group and GAL4 group). As shown in Figure 3B, the binding rate for TfRscFv-GAL4 fusion protein with 7 different tumor cells varied between 8.23% to 54.11%, and there was a significant difference in terms of the binding rate between the TfRscFv-GAL4 group and the negative control group (p<0.01). It showed that the purified TfRscFv-GAL4 retained its immunoreactivity comparable with that of the parental anti-TfR mAb.
Ag-binding potency of TfRscFv-GAL4 with various tissue microarray (TMA) sections
According to the standard of TMA sections described in “Methods”, for gastric cancer TMA sections (total 140 cases), the available cases was 115 for TfRscFv-GAL4 fusion protein group, 95 for mouse anti-TfR antibody group, were 116 and 113 in mouse anti-GAL4 antibody group and mouse nonspecific IgG group, respectively. The available ratios were 85%, 70%, 85% and 83%, respectively. For gastric cancer TMA sections, the positive ratios were 75.32%, 78.46%, 0% and 0%, respectively (Figure 4A,C,E and G). For two breast cancer TMA sections (total 112 cases), the available cases were 110, 108, 109 and 108, respectively; the available ratios were 98%, 96%, 97% and 96%, respectively. For two breast cancer TMA sections, the positive ratios were 63.25%, 64.57%, 0% and 0%, respectively (Figure 4B,D,F, and H). The available ratios and positive ratios for TMA sections were showed in Table 1. There was a significant difference for the positive ratio between the TfRscFv-GAL4 group and the negative control group (mouse anti-GAL4 group and mouse nonspecific IgG group) (p<0.01).
In contrast to the normal tissue sections, only 5 liver cases for the normal tissue sections showed weakly positive for the TfRscFv-GAL4 fusion protein group and mouse anti-TfR antibody group, while other tissues including the heart, spleen, adrenal cortex, blood vessels and stomach were negative for both groups (Figure 5A-F). Of note, all normal tissue sections were negative for the mouse anti-GAL4 group and mouse nonspecific IgG group.
Reactivity of TfRscFv-GAL4 with anti-GAL4 antibody
To measure the binding activity of GAL4 domain for the purified TfRscFv-GAL4 fusion protein, we performed the ELISA analysis. The results revealed that both TfRscFv-GAL4 fusion protein and GAL4 protein bound to a rabbit anti-GAL4 antibody coated on the surface of a microtiter plate in a dose-dependent manner. Furthermore, the OD495 value increased with the parallel increase of the protein concentration (0.078~10 μg/ml) as shown in Figure 6. Thus, the GAL4 portion among TfRscFv-GAL4 fusion protein retained its high avidity for binding to rabbit anti-GAL4 antibody and it suggested the fusion protein re-naturation did not impair the GLA4 activity.
Functional characterization of the fusion proteins
The ability of protein-DNA binding was used to assess the biological activity of GLA4 in TfRscFv-GAL4 fusion protein. In the presence of the proper conjugating condition, the purified protein were then added to the plasmids with varying concentration to form the protein-DNA complex which were analyzed by electrophoresis on 4.5% gradient natural (non-SDS) PAGE followed by Western analysis, it showed that only one protein band could be seen but the moved protein band was dose-dependent with addition of DNA plasmids with the optimal molar ratio of protein to plasmid was 1:2.5 (data not shown). These constitutive proteins also served as a basis of comparison for the activities of the fusion protein. Flow cytometry was used to analyze the transfection efficiency of the protein-DNA complex mediated by TfRscFv portion. After a 48-hour incubation, expression of the GFP reporter gene was found in (43.0±1.85)% of HepG-2 cells that had been transfected with the mammalian expression plasmid of GAL4rec-GFP-pGes in the complex group (TfRscFv-GAL4+GAL4rec-GFP-pGes), in (5.2±0.23)% and (1.7±0.18)% of cells transfected with control and in (3.9±0.34)% transfected with naked DNA plasmid. It indicated that the endocytosis of the TfRscFv-targeted complex to tumor cells was significantly higher than those without TfRscFv as target molecule. In addition, Figure 7 in columns B,D,F, and G also illustrated that the capability of TfRscFv-GAL4 to mediate transfer GAL4rec-GFP-pGes expression plasmid into HepG2 cells as compared to GFP-pGes plasmid without GLA4, TfRscFv alone did not exhibit any DNA-binding capacity, confirming that the DNA-binding capacity of TfRscFv-GAL4 was strictly a function of the GAL4 component.
Recently, non-viral vectors are under intense investigation as a safer alternative for gene therapy. For successful delivery, efficient and specific targeting of an active agent to the desired site is a critical factor for overcoming many barriers to carry DNA to nuclear localization and transcription . Some of the most common non-viral vectors include polyethylenimine, dendrimers, chitosan, polylysine, and many types of peptides, which are generally cationic in nature and able to interact with plasmid DNA through electrostatic interactions . Peptide-based vectors are advantageous over other non-viral strategies in that attachment of a peptide ligand to the polyplex will allow targeting to specific receptors and/or specific cell types, particularly in cancer cells . However, an important drawback of the chemical coupling procedure is the difficulty in producing a reproducible and homogeneous product. Genetic engineering provides an alternative approach for large scale production of homogeneous Ab-GLA4 fusion proteins.
Previous studies have consistently suggested that TfR is expressed more abundantly in malignant tissues than that in their healthy counterparts [3–8]. Similarly, serum levels for soluble transferrin receptor (sTfR) in patients with hepatoma and haematologic malignancies are significantly increased as compared with those of normal controls . Administration of anti-TfR antibody suppressed tumor cells growth in vitro . Most importantly, TfR served as an endocytotic receptor which could carry the vector for uptake by the tumor cells . Based on these findings, anti-TfR antibody is now considered as an alternative for diagnosis by imaging localization and for treatment targeting tumors [9, 25–30]. The TfR-specific monoclonal or chimeric antibodies (mAbs) have been developed and used as an alternative therapeutic approach to kill malignant cells both in vitro and in vivo [31–33]. Although promising, this approach requires that unique chimeric molecules be constructed for each specific application or incapability to penetrate tissues for the high molecule weight of complete human-mouse chimeric TfR antibody. Thus, it also faces a formidable challenge which sometimes can lead to a decreased activity or loss of activity of one or both of the covalently conjugated partners. To overcome these limitations, it is therefore desirable to develop a universal delivery system that eliminates the need for a specific construct for each individual application.
The single chain antibody possesses the property to be integrated with different proteins for preparing some tumor targeting vectors (e.g. the complex constructed by chemical coupling method or the fusion protein constructed by gene engineering technique). Another critical feature for the single chain antibody is the low molecular weight (about 27 KDa, the 1/3 of chimeric antibody), which renders it with enhanced capability to penetrate tissues and cells. If TfRscFv is inserted into a eukaryocyte expression vector, the vector would be much more efficiently intaken by malignant cells. TfRscFv can be expressed in tumor cells by the vector. By using this approach, the efficiency for cancer therapy has been significantly improved and the dosage for anti-tumor drugs can also be reduced [34, 35].
GAL4 is an 881-amino-acid protein with a Zn-Cys binuclear cluster type DNA-binding domain which is a positive regulator for galactose-induced gene expression . The DNA-binding domain can specifically bind to a 17bp recognizing sequence motif (GAL4rec). Previous studies demonstrated that the fusion protein GAL4/Inv could be used in a DNA delivery system to target tumor cells . Therefore, GAL4 could be used as a carrier for a plasmid containing the GAL4rec gene sequence.
In the current investigation, we generated and characterized bifunctionally active a TfRscFv-GAL4 fusion derived from plasmid pUC19 and pABgal4. TfRscFv-GAL4 with hexahistidine residues at the N-terminus were expressed in E. coli and recovered from the inclusion bodies with subsequent application of metal-chelate affinity chromatography. The fusion protein described in the present study is the first example of recombinant TfR single-chain monovalent antibodies with GAL4 DNA-binding activity produced in prokaryotic expression system, whereas either constituent component of recombinant protein showed individual activity through the following assays.
FCM assay revealed that the TfRscFv-GAL4 fusion protein is capable of binding to tumor cells, whose immune-reactivity is consistent with the parental anti-TfR monoclonal antibody. Therefore, our studies provided direct evidence that TfRscFv -GAL4 fusion protein, instead of GAL4 protein, could bind to various tumor cells. We also found that the binding rate for the TfRscFv-GAL4 fusion protein with seven different tumor cell lines varied between 8.23% and 54.11%. The differences for the binding rate may account for TfR being found expressed preferentially in the proliferation or differentiation stage of these cells rather than G0 stage, which was consistent with the results from Crepin R et al.  and our own results previously . ELISA analysis indicated that the TfRscFv-GAL4 fusion protein can bind to anti-GAL4 antibody. Therefore, it showed that the fusion protein retained GLA4 activity and could also be served as a marker to evaluate the binding capability of TfRscFv with tumor cells. By using a mouse antibody against GAL4 and a FITC-labeled anti-mouse antibody, FCM assay was applied to detect the binding capability of the fusion protein with cells expressing TfR. Similarly, an HRP-labeled anti-mouse antibody could be used for detecting the binding capability of the fusion protein with tissues through TMA assay. Immunohistochemical studies in TMA indicated that both TfRscFv-GAL4 fusion protein and the mouse anti-TfR monoclonal antibody could bind to gastric cancer cells as well as breast cancer cells. In sharp contrast, neither GAL4 protein nor mouse non-specific IgG showed such binding activity, indicating that TfRscFv-GAL4 fusion protein binding to human gastric cancer cells and human breast cancer cells is through the TfRscFv domain but not GAL4 protein domain. Furthermore, except for 5 normal liver tissues with weekly binding activity, TfRscFv-GAL4 fusion protein and the mouse anti-TfR antibody failed to show any binding activity to normal tissues, suggesting that TfRscFv-GAL4 fusion protein was relatively specific to tumor tissues.
We designed the DNA-binding functional assay to further determine the fusion protein function. After conjugating the TfRscFv-GAL4 to the plasmid GAL4rec-pGes which was engineered to include a specific long sequence in the upstream activating sequence (5'-cggrnnrcynyncnccg-3', GAL4rec) and reporter gene GFP, protein-DNA complex incubated with hepatic carcinoma cells HepG2, and the GFP expression in cells was detected by fluorescence microscopy. Cells treated with complex TfRscFv-GAL4-GAL4rec-GFP-pGes showed a strong fluorescence signal, but cells treated with GAL4 lacking the TfRscFv, or those treated with TfRscFv without GLA4 portion, or naked DNA alone almost did not fluoresce. These data demonstrated that this process was in fact GLA4-DNA recognition and then mediated through the attachment of the scFv to the transferrin receptor on the tumor cells, and the fusion protein has the unique capacity to mediate gene transfer. Taken together, this protein-DNA may be considered as a promising candidate for developing novel tumor-targeted gene delivery for systemic gene therapy of various human cancers.
We generated a novel DNA delivery vehicle containing single chain variable fragment of anti-transferrin receptor (TfRscFv) and GLA DNA binding domain (GAL4-DBD). GAL4-DBD is capable of binding DNA containing its specific binding sequence, and TfRscFv binding TfR on tumor cells is able to uptake by tumor cells through cell membranes to deliver DNA. This approach entailed covalently conjugating the fusion protein TfRscFv-GAL4 to the plasmid via a GAL4 at the 3’-end of the protein recognizing GAL4rec on the transfected plasmid (GAL4rec-GFP-pGes). Our results showed that this recombinant protein does not impair the immunological activity or targeting ability of the TfRscFv, as well as the functional avidity of GLA4 recognizing the GAL4rec sequence. The TfRscFv-GAL4 targeted the protein-DNA complex to tumor cells and enhanced the transfection efficiencies in vitro, but it did not exhibit the binding activity for normal tissues. The potential utility and appeal of this peptide-guided gene delivery lies with its internalization, the ability to control the nature of its constituent parts, and ease of generation. Briefly, this investigation provided basis for TfRscFv-GAL4 applications of orientation, tracing, imaging and targeted therapy on tumors.
All cancer cell lines such as HepG-2 (hepatocellular carcinoma cell line), HeLa (human cervical carcinoma cell line), MCF-7 (human breast cancer cell line), SLC-89 (human lung adenocarcinoma cell line), MDA-MB-231 (breast cancer cell line), HL-60 (Human promyelocytic leukemia cells) and MKN-28 (gastric cancer cell line) were purchased from ATCC. They were stored in our laboratory and cultured with the basal medium DMEM (GIBCO, USA) or RPMI 1640 (GIBCO, USA) containing 10% fetal bovine serum (GIBCO, USA) at 37°C with 5% CO2. For transfection, 1 × 105 cells were initially seeded in 1 ml of medium in 12-well culture plates and transfected at 80% confluency.
Prokaryotic expression vector of the TfRscFv-GAL4-pET28a
A fragment for the TfRscFv cDNA was directly amplified by PCR using the amplimers 5'-CGGCCATGGCCCACGTTCAGCTGCAGCAGT-3' and 5'-GGCGGAATTCTTTGATTTCCAGCTTGGTC-3' from a pUC19 plasmid containing the TfRscFv sequence as described before . The fragment for GAL4 was released from a pABgal4 plasmid (kindly provided by Dr. Bert W. O' Malley, Baylor College of Medicine, Houston, TX) by digestions of EcoRI and NotI restriction endonucleases (Thermo Scientific Fermentas). The amplimers used were: 5'-CCG-GTATGGCTAGCCTGCAGAAGCTACTGTCTTCTATCG-3' and 5'-GAGCCGACCGGTACCTCAACTTACAGTCAACTGTC-3'. Both fragments for TfRscFv and GAL4 were introduced by ligation into expression vector pET28a (+) at the NcoI and NotI restriction site, respectively. In the resulting construct, pET28a (+), the hexahistidine sequence was fused in-frame to the GAL4 DNA-binding domain, followed by the (GGGGS)3 flexible peptide linker sequence and the carboxy-terminal 228 amino acids of TfRscFv (Figure 1). The resulted prokaryotic expression plasmid was referred as TfRscFv-GAL4-pET, which was subsequently transfected into E.coli BL21 (DE3) strain for plasmid DNA preparation. The inserted sequences were confirmed by restriction enzyme digestion with an agarose gel electrophoresis and DNA sequencing using an ABI PRISM ® 377 DNA Sequencer.
Expression and purification of TfRscFv-GAL4 fusion protein
E. coli BL21 carrying plasmid TfRscFv-GAL4-pET was grown at an A600 of 0.5~0.7 overnight. An 0.5 ml aliquot of inoculate was added to 20 ml Luria-Bertani medium (LB) containing 25 μg/ml ampicillin and 50 mM glucose (LBG). The synthesis of recombinant TfRscFv-GAL4 fusion protein was induced with 1.0mM IPTG (isopropyl-β-D-thiogalacto-pyranoside) (Thermo Scientific Fermentas). Following 6h of incubation at different temperatures of 23°C, 30°C, 37°C, cells were harvested by centrifugation at 5000 g for 10 min at 4°C. Cell pellets were frozen at −20°C and resuspended in lysis buffer (6M guanidine-HCl, 20 mM sodium phosphate pH 7.8, 500 mM sodium chloride), sonicated 3×, and 0.45 μm filtered to remove insoluble debris. The extract of inclusion bodies was analyzed by 12.5% polyacrylamide gel electrophoresis (SDS-PAGE) under reducing conditions described as before [2, 12]. Because TfRscFv-GAL4-pET expression vectors introduce a (His)6 tail at the C-terminus of the recombinant TfRscFv-GAL4, The solubilized fusion protein was purified by immobilized metal affinity chromatography (IMAC) through the binding of His-tag with Ni2+-nitrilotriacetate (Ni-NTA) agarose column (Invitrogen, USA) according to the manufacturer’s protocol as previously described [12, 38] with minor modifications. After the solubilized inclusion bodies were passed through the column, the column was washed with 10 column volumes of 6M guanidine, 0.1 M Tris–HCl (pH 7.0) followed by 10 bed volumes of 6M urea, 50 mM Tris–HCl, 10 mM imidazole and 20 bed volumes of 6 M urea, 50 mM Tris–HCl, 50 mM imidazole. TfRscFv-GAL4 was eluted with 20 ml (4 bed volumes) of 6M urea, 50 mM Tris–HCl, 250 mM imidazole, and was then dialyzed in TEA (0.4 M L-arginine, 0.1 M Tris–HCl, 2 mM EDTA, pH 7.0) overnight. Optimal dilutions were determined empirically to avoid aggregation during refolding. Protein re-naturation was based on a procedure developed for the GLA4 fusion protein . After dialysis, 60-75% of the re-natured protein was recovered in the soluble fraction after centrifugation. The concentration of fusion protein was calculated by bicinchoninic acid-based protein assay (BCA Protein Assay; Pierce, Rockford, IL), and plasmids pUC19, pABgal4 transformed E. coli BL21 to express protein as controls.
Western blot analysis
E. coli BL21 lysates, and extracted inclusion bodies, which had been dialyzed in TEA before electrophoresis, or purified TfRscFv-GAL4, were resolved in 12% SDS–PAGE (Bio-Rad) under reducing conditions for Western blotting. Immunoblot analysis was carried out with the mouse mAb to GLA4 epitope (Sigma) as the primary antibody, peroxidase labeled horse anti-mouse IgG (Sigma) was used as the secondary antibody for GLA4 and results were visualized with DAB. Western blot with human TfR was used to determine the binding activity of purified TfRscFv-GAL4. Human TfR was electrophoresed in SDS-PAGE and blotted as described above. The membrane was sequentially incubated with the TfRscFv-GAL4 (primary antibody), the GLA4 mAb, biotinylated horse anti-mouse IgG (secondary antibody).
The antigen-binding activity of TfRscFv in TfRscFv-GAL4 fusion protein was analysed by an indirect Immunofluorescence Assay as described before [12, 38]. Briefly, 2 × 105 of HepG-2, HeLa, MCF-7, HL-60, MDA-MB-231, MKN28 and SLC-89 cells were collected at logarithmic phase. After washed with washing buffer (cold PBS, 1% BSA, 1mM CaCl2, 1mM MgCl2), the cells were incubated with TfRscFv-GAL4 for 20 min at 4°C, then treated with a mouse anti-GAL4 antibody and stained with FITC goat anti-mouse IgG. The cells were next analyzed by flow cytometry using the Cell Quest software package (Becton–Dickinson FACScalibur, USA). A mouse anti-TfR monoclonal antibody was used as a positive control, while the GAL4 protein and mouse non-specific IgG were used for isotype controls.
Construction of tissue microarrays (TMA) and Immunohistochemistry (IHC)
Paraffin-embedded tissue samples based on availability of resected tissues from 140 patients with gastric cancer and 112 patients with breast cancer which were obtained from the archives of Department of Pathology, Medical School of Jianghan University, Tongji Hospital of HUST and Department of Pathology, Medical School of Peking University. Tissue sections originated from autopsy samples such as from heart, blood vessels, liver, adrenal cortex, spleen and stomach were used as normal controls (each tissue included 5 cases), which were provided by the Department of Pathology, Medical School of Jianghan University and Tongji Hospital of HUST. The formalin-fixed, paraffin-embedded tissue blocks and the corresponding histological HE-stained slides were overlaid for tissue TMA sampling. Representative areas of tumor tissues were marked on the slides. A tissue arraying instrument (Beecher Instruments, Silver Spring, MD, USA) was used to punch triplicate 0.6-mm-diameter cylinders of tissue from selected cancer areas of individual donor tissue block and re-emb into a recipient paraffin block at a predefined position. Subsequently, multiple sections (5μm thick) were cut from the TMA tissue array.
IHC was employed to measure the Ag-binding rates for TfRscFv-GAL4 fusion protein with various tumor TMA sections. The immunohistochemical study of Ag-binding was performed using a standard streptavidin-peroxidase method described previously . The endogenous peroxidase activity was blocked with 3% H2O2 for 10 minutes. For antigen retrieval, slides were immersed in 10 mM citrate buffer (pH 6.0) and boiled for 15 minutes in a microwave oven. Non-specific binding was blocked by 5% normal goat serum for 10 minutes. The slides were treated with a mouse anti-GAL4 antibody after incubated with TfRscFv-GAL4 against TfR expressing on TMA at 4°C overnight in a moist chamber followed by incubating with HRP labeled goat anti-mouse IgG (Southern Biotechnology Associates, USA) for 20 mins at 37°C, and then with streptavidin-peroxidase conjugate, each for 30 mins at room temperature. The parental mouse anti-TfR antibody (Mouse anti-TfR group) was used as the positive control, and Mouse IgG group and GAL4 group, was used as the negative control, respectively. The TMA were finally stained with 3, 5-diaminobenzidine (DAB) reagents and incubated with hematoxylin to stain the nuclei, and results were evaluated under a light microscope. For the evaluation of TMA staining, a semi-quantitative scoring criterion was used, in which both staining intensity and positive cells percentage were scored. A staining index (with values from 0 to 12) was obtained as the intensity of TfR staining (0=negative, 1=weakly positive, 2=positive, 3=strongly positive) times the proportion of immune-positive tumor cells (0%=0; <10%=1; 10%≤ to<50%=2; 50%≤to <75%=3; ≥75%=4; both cross products ≤1 was judged as negative value and ≥2 as positive value. All histological evaluations were carried out in a double-blind manner by two expert pathologists (DH and YQ).
ELISA-based binding assay
It was employed to an ELISA-based assay to determine the protein activity of GAL4 domain for the TfRscFv-GAL4 fusion protein when bound and not bound to its special anti-GLA4 antibody. Briefly, the GAL4 or TfRscFv-GAL4 was coated in a 96-well plate (100 μl/well) at 4°C overnight. After washes with PBS (containing 0.005% Tween-20), the plate was blocked for 2 h at 37°C, followed by incubation with a rabbit anti-GAL4 antibody (0.1 μg/ml, Invitrogen, USA) for 2 h at 37°C. Next, HRP labeled goat anti-rabbit IgG (1:5000, 100 μl/well, Southern Biotechnology Associates, USA) was applied and incubated for 1h at 37°C. Freshly prepared substrate solution (100 μl/well) was finally added and incubated for 15 min at room temperature, and the results were read by a photometer at 495 nm (TECAN, USA) after application of stop solution (50 μl/well) for color development. As a negative control, the conventional TfRscFv was used.
Functional assay of GAL4-DNA binding
The protein-DNA complex was generated prior to GAL4-DNA binding assay. Mammalian expression vectors GAL4rec-GFP-pGes (Shanghai BlueGene Biotech Co., Ltd. Shanghai, China) encoding the green fluorescent protein (GFP) with the human cytomegalovirus promoter (pCMV), was made by ligating the consensus 17-bp sequence(5'-cggrnnrcynyncnccg-3') recognizing GAL4, The resulting plasmids, which contained eight tandem copies of the target oligonucleotide and its sequence was identified by our research group previously(unpublished data), amplified in the DH5 a strain of E. coli, and purified according to E.Z.N.A.®Plasmid Maxiprep Kit (OMEGA, USA) and their concentrations were measured by UV meter (Gene Spec I, Japan).
Dilutions of purified and re-natured TfRscFv-GAL4 in re-naturation buffer were mixed with Plasmid DNA (GAL4rec-GFP-pGes plasmid or GFP-pGes plasmid) in a total volume of 20 μl with varying concentration ratio of protein-DNA between 0.5 to 10.0. The mixtures were conjugated in the reaction system of protein-DNA linking buffer (25 mM HEPES pH 7.6, 50 mM KCL, 5 mM MgCL2, 100 μM ZnCl2, 0.1 mM EDTA, 0.1% Nonidet P40, 10% glycerol, 200 μg/ml BSA, 50μl/ml poly(dI-dC)) for 15 min at 25°C. The solution was mixed well for 10 min by gently inversion several times to produce the complex of TfRscFv-GAL4 and GAL4rec-GFP-pGes. Then, 4.5% gradient (non-SDS) PAGE followed by Western analysis was also used to assess the optimal molar ratio of protein to plasmid as 1:2.5. In Accordance with the complex transfection protocol , the hepatic cancer cells HepG-2 (5x105/well) were seeded in 12-well culture plates 24h before transfection. The culture medium was replaced with free-FBS RPMI-1640 medium before the sequential addition of 0.1 ml protein-DNA complexes of TfRscFv-GAL4 and GAL4rec-GFP-pGes, after incubation for 5h in 5% CO2 at 37°C, 1 ml of medium with 10% FBS was added and incubated for another 48h. Alternatively, the purified protein GAL4, TfRscFv, or the vector (GFP-pGes) complex as different controls and phosphate buffered saline(PBS) as a blank control, respectively. On the day of harvest, cells transfected with pCMV-GFP were washed with PBS and trypsinized. The transfection efficiency was evaluated by scoring the percentage of cells expressing GFP using a FACS Calibur System (Becton-Dickinson). The experiments were performed in triplicate, and 10,000 cells were counted in each experiment.
All results from each experiment were expressed as mean ± SEM with number (n) of observations. Sets of data were compared with an analysis of variance (ANOVA) or a Student’s t test. Differences were considered statistically significant when P < 0.01. Symbols used in figures were (*) for P > 0.05 and NS for no significant difference. All statistical tests were performed using GraphPad Prism version 4.0 for Windows (Graph pad Software).
The materials and methods of our study were approved by the Ethics Committee of Tongji Hospital of Huazhong University of Science and Technology (HUST), Jianghan University and Peking University. The written informed consent was obtained from each participating patient (or patient guardian) before entry into the study. The study was conducted in accordance with the Declaration of Helsinki.
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We thank Dr. Zhang Qiang and Bob Lee (Northwestern University Feinberg School of Medicine) for writing assistance and Prof. Chung Lee (University of California at Irvine) for revision of the manuscript. This work was supported by National Natural Science Foundation of China (No. 81173608 & No.81101944) and Hi-Tech Research and Development Program of China (No.2012AA02A306 to P.L.) and Seed Foundation of HUST (No.2011JC038 to Z.H.W).
The authors declare that they have no competing interests.
ZW, QY and HH designed and carried out the study and drafted the manuscript. TL, JL, SZ helped to draft the manuscript. XZ performed the the statistical analysis. ZH, CW, ZY and GS participated in its design and coordination and helped to draft the manuscript. All authors read and approved the final manuscript.
Qing Ye, Heyu Hu contributed equally to this work.
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