Table 1 Selection of promoters from endogenous genes of C. oleaginosus. UBIp, 60Sp, D9FADp and PPIp were newly identified in this study
# | Promoter | Gene of origin | Gene ID | Length selected | 5’UTR | Count of CT-motifs (41 bp) | Length of CT-rich regions (bp) |
|---|---|---|---|---|---|---|---|
1 | GAPDHp | Glyceraldehyde 3-phosphate dehydrogenase | 276,138 | 800 | yes | 96 | 134, 82 |
2 | UBIp | Ubiquitin and ubiquitin-like proteins | 289,369 | 463 | yes | 70 | 59, 96, 82, 66 |
3 | 60Sp | 60 S ribosomal protein L37 | 224,393 | 421 | no | 4 | 113 |
4 | D9FADp | delta-9 fatty acid desaturase | 308,253 | 191 | yes | 76 | 66, 54 |
5 | PPIp | Cyclophilin type peptidyl-prolyl cis-trans isomerase | 286,945 | 154 | yes | 31 | 74, 51 |