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Table 2 Serotype identification of clinical E. coli isolates using ONT long reads with different assembly and read correction tools as predicted by ECTyper tool

From: The impact of applying various de novo assembly and correction tools on the identification of genome characterization, drug resistance, and virulence factors of clinical isolates using ONT sequencing

Sample

Serotype

Barcode 01

O102:H6

Barcode 02

-:H4

Barcode 03

O138:H48

Barcode 04

O81:H27

Barcode 06

O169:H9

Barcode 08

-:H4

Barcode 09

O15:H18

Barcode 11

O8:H12

Barcode 12

O77/O17/O44/O106:H18

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BMC Biotechnology

ISSN: 1472-6750

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