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Fig. 2 | BMC Biotechnology

Fig. 2

From: The impact of applying various de novo assembly and correction tools on the identification of genome characterization, drug resistance, and virulence factors of clinical isolates using ONT sequencing

Fig. 2

Pan-genomes of nine clinical E. coli isolates using Flye, Canu, Wtdbg2 and NECAT as read assemblers with and without Medaka, NextPolish and Racon read correction tools. a The total number of core genes present in all isolates, b The total number of accessory (shell and cloud) genes. Both of the core and the accessory genes were perfomed using the annotation tool (Prokka) and pan-genome tool (Roary)

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BMC Biotechnology

ISSN: 1472-6750

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