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Table 3 The DEGs of RNA-seq at 45 °C

From: rocF affects the production of tetramethylpyrazine in fermented soybeans with Bacillus subtilis BJ3-2

Gene ID

BJ 3–2 37 °C

BJ 3–2 45 °C

log2FC (BJ 3–2 45 °C/BJ 3–2 37 °C)

P-value

FDR

Regulate

BSU13700

77.522

5185.634

6.06

1.56E-16

5.70E-13

Up

BSU17820

0

6.491

6.04

1.01E-03

3.50E-02

Up

BSU02160

8.142

289.265

5.13

1.68E-12

8.78E-10

Up

BSU12300

35.418

1082.334

4.93

4.74E-13

4.13E-10

Up

BSU11750

32.984

1008.288

4.93

2.23E-12

9.01E-10

Up

BSU39580

12.584

358.188

4.82

4.26E-10

1.04E-07

Up

BSU12310

12.634

355.103

4.8

3.10E-12

1.03E-09

Up

BSU14569

53.082

1210.986

4.51

1.17E-07

1.77E-05

Up

BSU00240

138.86

2344.553

4.08

1.60E-09

3.65E-07

Up

BSU02970

10.84

146.608

3.75

1.15E-06

1.40E-04

Up

BSU02170

33.435

435.053

3.7

1.81E-09

3.87E-07

Up

BSU11740

25.23

323.403

3.67

1.36E-08

2.62E-06

Up

BSU12090

31.566

349.892

3.47

1.28E-07

1.86E-05

Up

BSU36970

40.022

429.186

3.42

1.79E-08

3.26E-06

Up

BSU12320

9.033

90.74

3.31

1.02E-07

1.61E-05

Up

BSU17320

2.032

20.756

3.29

1.33E-03

4.20E-02

Up

BSU12340

11.731

114.535

3.28

8.88E-08

1.47E-05

Up

BSU11760

8.632

81.025

3.22

2.99E-06

3.11E-04

Up

BSU12330

10.765

97.552

3.17

2.41E-07

3.25E-05

Up

BSU13520

4.768

33.11

2.77

1.24E-05

1.01E-03

Up

BSU10710

12.019

81.937

2.76

7.47E-04

2.78E-02

Up

BSU36960

49.193

320.369

2.7

1.70E-06

1.94E-04

Up

BSU12360

7.415

48.837

2.7

4.64E-06

4.23E-04

Up

BSU06850

9.309

60.185

2.68

9.66E-05

5.78E-03

Up

BSU12350

14.441

90.526

2.64

4.64E-06

4.23E-04

Up

BSU37620

100.13

605.721

2.6

1.28E-06

1.51E-04

Up

BSU19670

3.952

23.716

2.56

3.82E-04

1.70E-02

Up

BSU33510

27.25

151.488

2.47

6.82E-04

2.59E-02

Up

BSU22860

4.692

25.493

2.42

6.57E-04

2.52E-02

Up

BSU00430

2.886

15.713

2.4

6.57E-04

2.52E-02

Up

BSU11240

30.261

155.485

2.36

4.58E-06

4.23E-04

Up

BSU11230

27.363

133.296

2.28

1.20E-05

9.97E-04

Up

BSU38450

59.481

281.155

2.24

1.84E-05

1.37E-03

Up

BSU00640

30.035

135.911

2.17

1.36E-05

1.06E-03

Up

BSU00650

107.821

484.02

2.17

1.50E-05

1.14E-03

Up

BSU07140

30.763

135.31

2.13

3.92E-05

2.80E-03

Up

BSU32850

3.438

15.261

2.12

1.31E-03

4.18E-02

Up

BSU30270

9.623

41.992

2.11

6.52E-05

4.32E-03

Up

BSU00830

81.386

319.295

1.97

6.36E-05

4.30E-03

Up

BSU28060

23.9

93.458

1.96

7.45E-05

4.60E-03

Up

BSU11250

32.143

123.455

1.94

7.38E-05

4.60E-03

Up

BSU00660

35.405

134.701

1.92

7.38E-05

4.60E-03

Up

BSU36550

417.195

1556.086

1.9

5.17E-05

3.63E-03

Up

BSU19050

7.277

27.08

1.88

1.08E-03

3.68E-02

Up

BSU30280

10.263

35.571

1.78

4.72E-04

1.96E-02

Up

BSU30290

8.444

28.629

1.75

9.44E-04

3.34E-02

Up

BSU38080

223.922

747.383

1.74

1.76E-04

9.59E-03

Up

BSU31060

17.602

58.817

1.73

2.31E-04

1.16E-02

Up

BSU25150

9.698

32.51

1.73

1.03E-03

3.53E-02

Up

BSU16740

18.631

61.488

1.72

7.91E-04

2.86E-02

Up

BSU32180

5.357

17.113

1.66

1.45E-03

4.43E-02

Up

BSU33500

42.669

132.323

1.63

2.43E-04

1.20E-02

Up

BSU37630

40.825

124.492

1.61

3.84E-04

1.70E-02

Up

BSU24580

6.11

18.56

1.59

1.11E-03

3.74E-02

Up

BSU05880

7.189

21.896

1.59

1.46E-03

4.45E-02

Up

BSU12069

6213.887

18553.429

1.58

2.52E-04

1.22E-02

Up

BSU11780

41.076

122.185

1.57

1.24E-03

4.13E-02

Up

BSU27310

29.935

87.795

1.55

4.25E-04

1.81E-02

Up

BSU12050

125.11

367.154

1.55

4.93E-04

1.98E-02

Up

BSU33950

56.006

161.841

1.53

4.66E-04

1.95E-02

Up

BSU00840

153.025

433.769

1.5

4.94E-04

1.98E-02

Up

BSU37460

22.934

64.67

1.49

7.93E-04

2.86E-02

Up

BSU02360

243.519

638.924

1.39

7.36E-04

2.77E-02

Up

BSU40950

51.79

134.426

1.37

1.30E-03

4.18E-02

Up

BSU02350

68.903

174.218

1.34

9.74E-04

3.42E-02

Up

BSU31050

64.173

161.213

1.33

1.13E-03

3.79E-02

Up

BSU11220

71.588

176.107

1.3

1.30E-03

4.18E-02

Up

BSU15510

1928.76

14.424

 − 7.05

1.22E-13

2.22E-10

Down

BSU15520

2240.655

18.756

 − 6.89

1.97E-13

2.40E-10

Down

BSU15500

1042.241

8.719

 − 6.88

5.66E-13

4.13E-10

Down

BSU15530

2030.044

18.342

 − 6.78

9.39E-13

5.71E-10

Down

BSU15550

1525.052

14.708

 − 6.69

2.47E-12

9.01E-10

Down

BSU15560

2006.169

21.44

 − 6.54

4.81E-12

1.46E-09

Down

BSU11990

94,545.251

1019.604

 − 6.53

2.08E-12

9.01E-10

Down

BSU15540

1912.399

23.571

 − 6.34

1.31E-11

3.69E-09

Down

BSU15490

268.461

3.331

 − 6.29

2.98E-10

7.78E-08

Down

BSU37350

2,666,228.43

69,847.529

 − 5.25

8.15E-09

1.65E-06

Down

BSU01620

379.143

10.008

 − 5.23

2.88E-08

5.01E-06

Down

BSU37770

3233.527

117.411

 − 4.78

1.57E-07

2.20E-05

Down

BSU01600

79.028

3.085

 − 4.63

1.29E-05

1.02E-03

Down

BSU40330

4924.789

203.326

 − 4.6

4.62E-07

6.02E-05

Down

BSU37760

2661.551

110.143

 − 4.59

4.99E-07

6.28E-05

Down

BSU01630

639.373

31.384

 − 4.34

2.85E-06

3.06E-04

Down

BSU40340

9319.344

465.809

 − 4.32

2.35E-06

2.60E-04

Down

BSU18310

796.701

42.378

 − 4.23

3.91E-06

3.97E-04

Down

BSU38560

1224.887

65.094

 − 4.23

4.36E-06

4.23E-04

Down

BSU40320

6670.251

373.473

 − 4.16

6.14E-06

5.47E-04

Down

BSU18300

795.359

44.677

 − 4.15

6.46E-06

5.61E-04

Down

BSU15480

415.79

23.288

 − 4.15

8.63E-06

7.32E-04

Down

BSU30560

3284.05

218.997

 − 3.91

2.51E-05

1.83E-03

Down

BSU37260

331.894

22.608

 − 3.87

7.70E-05

4.68E-03

Down

BSU37250

732.741

53.182

 − 3.78

6.80E-05

4.43E-03

Down

BSU37780

9186.092

681.619

 − 3.75

5.73E-05

3.94E-03

Down

BSU38570

655.683

48.934

 − 3.74

1.60E-04

9.18E-03

Down

BSU33240

100.946

7.784

 − 3.68

2.00E-04

1.07E-02

Down

BSU34370

102.087

7.975

 − 3.66

3.79E-04

1.70E-02

Down

BSU01610

274.333

22.027

 − 3.63

1.70E-04

9.52E-03

Down

BSU37790

2151.666

174.823

 − 3.62

1.20E-04

7.04E-03

Down

BSU14700

3806.507

323.198

 − 3.56

1.61E-04

9.18E-03

Down

BSU38580

682.143

57.556

 − 3.56

1.72E-04

9.52E-03

Down

BSU33430

364.978

31.714

 − 3.52

2.20E-04

1.13E-02

Down

BSU29020

7948.458

696.634

 − 3.51

2.04E-04

1.08E-02

Down

BSU32130

1442.649

126.693

 − 3.51

2.22E-04

1.13E-02

Down

BSU18340

521.503

45.961

 − 3.5

2.12E-04

1.11E-02

Down

BSU29010

9626.346

860.824

 − 3.48

2.55E-04

1.22E-02

Down

BSU37420

432.702

39.14

 − 3.46

3.05E-04

1.43E-02

Down

BSU26900

2580.202

235.026

 − 3.46

3.82E-04

1.70E-02

Down

BSU34360

506.423

46.282

 − 3.45

3.92E-04

1.70E-02

Down

BSU18320

483.601

44.598

 − 3.44

2.97E-04

1.41E-02

Down

BSU39380

2061.209

196.04

 − 3.39

3.90E-04

1.70E-02

Down

BSU33440

188.58

18.049

 − 3.38

5.00E-04

1.98E-02

Down

BSU06530

1375.189

132.495

 − 3.37

4.26E-04

1.81E-02

Down

BSU06520

1500.562

147.454

 − 3.35

4.81E-04

1.97E-02

Down

BSU05370

35.066

3.369

 − 3.34

1.53E-03

4.61E-02

Down

BSU39370

2356.907

237.199

 − 3.31

5.63E-04

2.21E-02

Down

BSU06460

851.54

86.678

 − 3.29

1.44E-03

4.43E-02

Down

BSU37370

5365.257

567.502

 − 3.24

7.88E-04

2.86E-02

Down

BSU18330

185.255

19.877

 − 3.21

9.00E-04

3.22E-02

Down

BSU06590

161.895

17.886

 − 3.17

1.36E-03

4.23E-02

Down

BSU26820

20,896.556

2374.192

 − 3.14

1.30E-03

4.18E-02

Down

BSU13190

1899.828

215.47

 − 3.14

1.32E-03

4.18E-02

Down

BSU06510

1424.683

164.735

 − 3.11

1.61E-03

4.76E-02

Down

BSU37280

167.252

19.356

 − 3.1

1.60E-03

4.76E-02

Down