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Table 3 Phenotype and the detected mutations in the PDS-mutated potato plants

From: Generation of transgene-free PDS mutants in potato by Agrobacterium-mediated transformation

Tf. organ

Selection

Strain

Mutant

Pheno

type

Genotype*

Allele 1

Allele 2

(−AC)

Allele 3

(+ 16 bp)

Allele 4

(variant)

Tuber

Km

gv2260

PDS.12 g

green

Δ165 (2) Δ5 (2)

 

Δ165 (1)

 

PDS.5 m

mosaic

(tabby)

Δ1 (1)

wt (2)

 

wt (1)

Δ165 (7)

PDS.3w

white

   

Δ146 (1)

Δ166 (2)

PDS.11w

white

Δ104 (2)

   

LBA4404

PDS.28 g

green

Δ35 + T/A (5)

wt (1)

   

PDS.34 g

green

 

wt (1)

 

Δ165 (4)

Tuber

3d-Km

gv2260

PDS.73 g

green

wt (3)

wt (2)

Δ1 (1)

 

3d-Km

/5-FC

PDS.65 g

green

Δ1 (1)

wt (3)

wt (1)

  

3d-Km

LBA4404

PDS.48 g

green

Δ2 + T/A (1)

wt (1)

wt (2)

  

PDS.9 m

mosaic

(tabby)

Δ3 (1)

Δ1 (3)

wt (3)

 

3d-Km /5-FC

PDS.10 m

mosaic

(patchy)

wt (3)

  

Δ117 (1)

Leaf

3d-Km

gv2260

PDS.10 g

green

Δ1 + Δ3 (1)

wt (2)

wt (1)

  

3d-Km

LBA4404

PDS.1 g

green

Δ2 (1)

wt (6)

   

PDS.33 g

green

Δ2 + G/A (1)

wt (8)

   

3d-Km /5-FC

PDS.5 g

green

wt (3)

Δ2 + T/C (1)

wt (1)

  
  1. *Δ numbers indicate the size of the deletions in bp. Numbers in parenthesis specify the number of clones with identical sequence. /, base pair changes; wt, wild-type