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Table 2 Primers used for DHPLC and mismatch-specific endonuclease cleavage analysis of the HBB gene

From: Comparison of the mismatch-specific endonuclease method and denaturing high-performance liquid chromatography for the identification of HBB gene mutations

Primer Name

Sequence (5'-3')

PCR Length (bp)

Anneal Tm (°C)

DHPLC Tm (°C)

DHPLC %B

Start/end

5'-Label

B1

gacaggtacggctgtcatca

337

56

61

55–64 4.5 min

FAM

B2

gtctccacatgcccagtttc

    

HEX

B3

gaaactgggcatgtggagac

287

56

61

55–64 4.5 min

FAM

B4

agcttgtcacagtgcagctc

    

HEX

Y3

gtgtacacatattgaccaaa

423

56

56

56–65 4.5 min

FAM

Y4

agcacacagaccagcacgt

    

HEX