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Table 1 Reference strains included in the evaluation of orfX -LAMP

From: Rapid and simple detection of methicillin-resistance staphylococcus aureus by orfXloop-mediated isothermal amplification assay

Reference strains No. orfX
Gram-positive microorganisms   
Methicillin-resistant Staphylococcus aureus 10442, COL, N315, 85/2082, CA05, JCSC 1978, JCSC 4469, MR108, M03-68, WIS 10 +
Methicillin-sensitive Staphylococcus aureus ATCC6358, ATCC12598, ATCC12600, ATCC13150, ATCC13565, ATCC14458, ATCC19095, ATCC23235, ATCC27664, ATCC25923, ATCC29213 11 -
Methicillin-resistant coagulase-negative staphylococci: S. epidermidis ATCC29887, ATCC700586 2 -
Methicillin-sensitive coagulase-negative staphylococci: S. epidermidis ATCC12228, 6508, 9142, 9142-M10; S. haemolyticus 1922; S. hominis ATCC27844; S. capitis ATCC27840; S. saprophiticus ATCC35552; S. sciuri ATCC29062; S. schleiferi ATCC43808; S. intermedius ATCC49052 11 -
Listeria monocytogenes ATCC15313ATCC19111, ATCC19114, ATCC19115, ATCC19116, ATCC19118, WF 03213, WF 06410, WF 08211 8 -
Listeria invanovii ATCC19119, WF 06319 2 -
Listeria welshimeri WF 05086 1 -
Listeria seeligeri WF 04426 1 -
Bacillus cereus ATCC11778, ATCC12480, ATCC13061, ATCC14579, ATCC25621, ATCC53522 6 -
Gram-negative organisms   
Escherichia coli O157: H7 WF01201 ATCC43889, NCTC12900 3 -
Escherichia coli O157: H7 WF07803, WF06544, WF05395 3 -
Escherichia coli O157: H7 WF04402, WF05311, WF06837 3 -
Escherichia coli O157: H7 WF04587, WF08385, WF06349 3 -
Escherichia coli O26: H11 WF054489 1 -
Escherichia coli O127: H6 WF073522 1 -
Escherichia coli O148: H28 WF063224 1 -
Escherichia coli C600 ATCC25922, ATCC43984, ATCC43985, ATCC8739, C600, DH5α 6 -
Vibrio parahaemolyticus O1: K25 WF 04213 1 -
Vibrio parahaemolyticus O1: K56 WF 02314 1 -
Vibrio parahaemolyticus O3: K6 WF 04232 1 -
Vibrio parahaemolyticus O3: K6 WF 01031, WF 04506, WF 06215 3 -
Vibrio parahaemolyticus O3: K6 WF 02321, WF 03218, WF 05612 3 -
Vibrio parahaemolyticus O3: K12 WF 02108 1 -
Vibrio parahaemolyticus O3: K72 WF 02471 1 -
Vibrio parahaemolyticus O4: K37 WF 01309, WF 04238 2 -
Vibrio parahaemolyticus O4: K55 WF 03256, WF 07521 2 -
Vibrio parahaemolyticus O4: K68 WF 07926, WF 03422, WF 02613 3 -
Vibrio parahaemolyticus O10: K28 WF 06438 1 -
Vibrio parahaemolyticus ATCC17802, ATCC27969 2 -
Vibrio vulnificus ATCC27562 1 -
Vibrio mimicus ATCC33653 1 -
Psuedomonas aeruginosa ATCC 27853 1 -
Salmonella enterica ATCC13076, ATCC14028, ATCC19585, ATCC29629 4 -
Salmonella typhimurium ATCC 14028, WF 04313 2 -
Salmonella choleraesuis ATCC 13312 1 -
Salmonella enteritidis WF 05148, WF 07086 2 -
Salmonella typhi WF 03201, WF 05026, WF 08138 3 -
Salmonella paratyphi WF 06426 1 -
Salmonella aberdeen WF 04542 1 -
Salmonella gallinarum WF 05938 1 -
Klebsiella pneumoniae ATCC 13883 1 -
Enterobacter cloacae ATCC 23355 1 -
Yersinia enterocolitica ATCC9610, ATCC27729 2 -
Total 116