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Table 3 Correlating STR marker fragment length with repeat number

From: Authentication of African green monkey cell lines using human short tandem repeat markers

Human Marker

GenBank

Repeat Region

Allele Distribution (bp)

Number of Repeats

D8S1106

G09378

[ATAG]n

109, 121, 125, 129, 133

7, 10, 11, 12, 13

DYS389

G09600

[CTAT] n

321, 325, 329, 337

10, 11, 12, 14

D1S518

G07854

[AGAT] n

182, 186, 190, 194, 198

13, 14, 15, 16, 17

D6S1017

G08578

[ATCC] n [ACCC] n [ACCA] n

354, 358, 362, 366, 370, 374

10, 11, 12, 13, 14, 15

D17S1304

G07960

[TATC] n

197, 201, 205, 209, 213

10, 11, 12, 13, 14

D4S2408

G08341

[ATCT] n [ACCC][ATCT] n [ACCT] n [ATCT]

336, 344, 348, 352, 356, 360

13, 15, 16, 17, 18, 19

D5S1467

G08455

[AGAT] n

173, 181, 185, 189

8, 10, 11, 12

D19S245

L13119

[ATCT] n [ATCA][TCTA] n

225, 229, 233, 237, 241, 245, 249

16, 17, 18, 19, 20, 21, 22

  1. The eight human STR markers incorporated in the multiplex assay with corresponding repeat region, fragment length (based on LIZ GeneScan™500 size standard), and number of repeats based on the DNA analysis from sixty-two vervet monkey samples. The correlation of the allele size and number of repeats was determined based on sequencing data.
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BMC Biotechnology

ISSN: 1472-6750

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