Table 5 Fold-change data comparison between different microarray labeling methods and qPCR for selected genes.
From: A rapid and inexpensive labeling method for microarray gene expression analysis
| Â | Fold-change | |||
|---|---|---|---|---|
Gene | Microarrays | Â | ||
| Â | Direct Random | Indirect | ds-cDNA | qPCR |
YNL072W (RNH201; Ref1) | 1.0 | 1.0 | 1.0 | 1.0 |
YLR185W (RPL37a; Ref2) | 1.0 | 1.1 | 0.9 | 1.0 |
YBL005W (PDR3) | 2.2** | 1.9 | 2.1 | 1.6** |
YDR011W (SNQ2) | 3.4** | 4.2* | 3.0* | 4.6** |
YDL020C (RPN4) | 1.9** | 1.8* | 1.7 | 3.6** |
YFR003C (YPI1) | 1.0 | 1.1 | 0.8** | 1.0 |
YGR035C | 12.6** | 11.7** | 7.3** | 10.8** |
YGR052W (FMP48) | 3.2** | 3.0* | 3.2* | 2.9** |
YGR236C (SPG1) | 0.4** | 0.4* | 0.7* | 0.5** |
YLR346C | 7.7** | 6.9** | 2.0** | 6.2** |
YOL156W | 12.9** | 9.7** | 4.2** | 6.8** |