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Table 2 In situ design of potential off-target locus

From: Generation of genome-edited dogs by somatic cell nuclear transfer

 

Sequences

Chr

Position

Dir

Mismatch

Mutation (#1/#2)

On-target

GTAGATGTCATGAGACGAGCNGG

5

61577522

+

0

 

Off-target 1

GTAGATGTgATGAcAgGAGCTGG

8

12929143

+

3

WT/WT

Off-target 2

cTAaATGTCATGAGAaGAGCAGG

30

14653215

+

3

WT/WT

Off-target 3

GTAGATGTCAgGAGAgGAGgGGG

7

39969232

+

3

WT/WT

Off-target 4

GTgGATGgCATGAGACGAGtGGG

17

53221459

−

3

WT/WT

Off-target 5

GTAGATGTgATGAaAtGAGCTGG

11

51558749

+

3

WT/WT

Off-target 6

aTAGATGTCATGAGAtGAGCTGG

24

32851089

−

2

WT/WT

  1. Letters with lowercase indicate mismatches with on-target sequence
  2. Chr chromosome number, Dir direction, Mismatch number of mismatches, Mutation sequence compared with WT