Table 4 Comparison of long repeat sequences in 11 cp genomes
From: Chloroplast genome sequencing based on genome skimming for identification of Eriobotryae Folium
Sample | Tandem repeat | Complement repeat | Forward repeat | Palindromic repeat | Reverse repeat | Total |
|---|---|---|---|---|---|---|
E. japonica-1 | 131 | 0 | 25 | 20 | 3 | 179 |
japonica-2 | 131 | 0 | 25 | 20 | 3 | 179 |
PPY-1 | 131 | 0 | 25 | 20 | 3 | 179 |
PPY-2 | 131 | 0 | 25 | 20 | 3 | 179 |
PPY-3 | 131 | 0 | 25 | 20 | 3 | 179 |
SP | 133 | 0 | 26 | 20 | 3 | 182 |
E. cavaleriei | 133 | 2 | 23 | 18 | 7 | 183 |
E. deflexa | 132 | 1 | 22 | 16 | 11 | 182 |
E. fragrans | 130 | 0 | 22 | 17 | 11 | 180 |
D. turbinata | 216 | 1 | 19 | 19 | 8 | 263 |
M. grandiflora | 49 | 0 | 11 | 16 | 0 | 76 |
total | 1448 | 4 | 248 | 206 | 55 | 1961 |