Table 1 Some diesel-associated genes present in CA16 that are similar in other microorganisms
Gene | Genome Position | Accession # | Predicted function | Most closely related RefSeq Protein | %ID |
|---|---|---|---|---|---|
Alkane hydroxylase (AlkM) | 1203709–1204902 | AQZ81143 | Alkane Monooxygenase Complex, Alk gene cluster | alkane 1-monooxygenase [Acinetobacter guillouiae] WP_004720613.1 | 99.45 |
Transcriptional Regulator (AlkR) | 1813655–1812696 | AQZ81718 | Regulation of hydrocarbon degradation Alkane Monooxygenase Complex, Alk gene cluster | AraC family transcriptional regulator [Acinetobacter calcoaceticus] WP_080026973.1 | 100 |
Esterase (EstB) | 363212–361917 | AQZ80440 | Esterase; Alkane Monooxygenase Complex, Alk gene cluster | MULTISPECIES: serine hydrolase [Acinetobacter] WP_075431253.1 | 99.77 |
Rubredoxin A (RubA) | 1004293–1004457 | AQZ80981 | Alkane degradation | MULTISPECIES: rubredoxin [Bacteria] WP_000760495.1 | 100 |
Rubredoxin B (RubB) | 1004198–1003023 | AQZ80980 | Alkane degradation; NAD(P)H-dependent rubredoxin reductase | MULTISPECIES: FAD-dependentoxidoreductase [Acinetobacter] WP_003653048.1 | 99.75 |
Lipoyl Synthase (LipA) | 1866491–1865511 | AQZ81763 | Protein lipoylation | lipoyl synthase [Acinetobacter calcoaceticus] WP_080026996.1 | 100 |
Lipoyl Synthase (LipB) | 3254410–3255063 | AQZ82924 | LipA Chaperone Protein | lipoyl (octanoyl) transferase LipB [Acinetobacter calcoaceticus] WP_005036485.1 | 100 |
Outer Membrane Protein A (OmpA) | 861883–862536 | AQZ80868 | Type IV Secretion | MULTISPECIES: OmpA family protein [Acinetobacter] WP_005042643.1 | 100 |
Outer membrane lipoprotein (wza) | 36420–35323 | AQZ80175 | wee Gene Cluster (polymer export: potential channel) | polysaccharide biosynthesis/export family protein [Acinetobacter calcoaceticus] WP_080026070.1 | 100 |
Protein tyrosine kinase (wzc) | 34868–32688 | AQZ80173 | wee Gene Cluster (polymer export: autophosphorylation) | polysaccharide biosynthesis tyrosine autokinase [Acinetobacter calcoaceticus] WP_080026068.1 | 100 |
General secretion pathway protein E (xcpR) | 634244–635575 | AQZ80682 | Secretory Protein, associated with regulating dodecane degradation | MULTISPECIES: type II secretion system ATPase GspE [Acinetobacter] WP_004641278.1 | 100 |