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Fig. 1 | BMC Biotechnology

Fig. 1

From: Overexpression of a rice BAHD acyltransferase gene in switchgrass (Panicum virgatum L.) enhances saccharification

Fig. 1

Phylogenetic tree of OsAT10 orthologs from selected grasses. The predicted amino acid sequences of OsAT10 orthologs from Oryza sativa (XP_015641801.1), Setaria viridis (Sevir.4G238000.1), Panicum virgatum (Pavir.J252500.1 and Pavir.Da00636.1), Zea mays (XP_008647983.1), Hordeum vulgare (BAK07645.1), Triticum urartu (EMS54808.1), Panicum hallii (Pahal.D00987.1), Brachypodium distachyon (XP_003563687.1), and Sorghum bicolor (XP_002438629.1) were aligned with the ClustalX2.1 program. Two putative OsAT10 orthologs were identified from switchgrass (P. virgatum), and Pavir.J252500.1 (81% identity to OsAT10) was designated as PvAT10 in this study based on its higher percentage of identity to OsAT10 and a higher expression level, compared to Pavir.Da00636.1 (79% identity to OsAT10). The phylogenetic tree was generated using the neighbor-joining (NJ) method with 1000 bootstrap values and was visualized using the FigTree program

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BMC Biotechnology

ISSN: 1472-6750

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