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Fig. 2 | BMC Biotechnology

Fig. 2

From: The importance of genotype identity, genetic heterogeneity, and bioinformatic handling for properly assessing genomic variation in transgenic plants

Fig. 2

Distribution of unique SNPs across transgenic series ST77. The distribution of the 143 unique SNPs identified in ST77 is shown among the 20 chromosomes. Almost all of the ST77 SNPs (140 out of 143) cluster at a single locus on chromosome 15, which is a typical signature of genetic heterogeneity among the ‘Williams 82’ parental lines used in this study. The clustering of SNPs at specific, rather than random, positions is indicative of heterogenous standing variation that has previously documented in the ‘Williams 82’ cultivar [30]

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