Fig. 1From: The importance of genotype identity, genetic heterogeneity, and bioinformatic handling for properly assessing genomic variation in transgenic plantsReanalysis of series 764 reveals that its genetic background comes from genotype ‘Thorne’ rather than genotype ‘Williams 82’. 525 SNPs were identified that met two criteria: (1) they were consistently polymorphic between series 764 plants and the ‘Williams 82’ reference genome in the RNA-seq dataset; (2) they were previously genotyped across the USDA germplasm [27]. A comparison of these SNPs to the all of the accessions in the USDA soybean accessions revealed ‘Thorne’ as a near-perfect match (99.2% identity), with a substantial gap to the next closest match (Washita at 74.2%). The reanalysis also confirmed that this panel of SNPs is completely polymorphic between the 764 series and ‘Williams 82’ (0% match)Back to article page