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Table 4 Comparison of the genes that were down-regulated (fold change) in SCNT placentas versus in aggregated SCNT placentas

From: Abnormal gene expression in regular and aggregated somatic cell nuclear transfer placentas

Gene symbol

Accession No.

Folder Δ SCNT/Agg

Folder Δ SCNT/Con

Folder Δ Agg/Con

C6

NM_016704.1

−2.05**

−1.75*

1.17

5033414D02Rik

NM_026362.1

−2.04**

−1.86*

1.10

Sftpd

NM_009160.1

−4.68**

−4.14**

1.13

Tph1

NM_009414.2

−4.20**

−2.65*

1.59

2010109I03Rik

NM_025929.2

−4.04**

−2.75**

1.47

Amn

NM_033603.2

−3.55**

−4.03**

−1.14

Cbx7

NM_144811.3

−3.46**

−3.10**

1.12

Osta

NM_145932.3

−3.40**

−2.88*

1.18

Entpd2

NM_009849.1

−3.30**

−3.64**

−1.10

Bex4

NM_212457.1

−3.26**

−3.50**

−1.07

Serpina10

NM_144834.3

−3.25**

−2.39*

1.36

Fga

NM_010196.1

−3.18**

−3.51**

−1.10

1700045I19Rik

NM_028842.1

−3.13**

−3.47**

−1.11

Fga

NM_010196.2

−3.10**

−3.47**

−1.12

BC040758

NM_001033364.1

−2.99**

−3.34**

−1.12

Maob

NM_172778.1

−2.99*

−2.95*

1.01

BC040758

NM_001033364.1

−2.97**

−3.34*

−1.12

Fcgrt

NM_010189.1

−2.94**

−2.75**

1.07

Cldn2

NM_016675.3

−2.91**

−2.93**

−1.01

Psca

NM_028216.1

−2.90**

−4.43**

−1.53

1600015I10Rik

NM_001081273.1

−2.89**

−4.64**

−1.61

Bex2

XM_977338.1

−2.88**

−2.52*

1.14

Apom

NM_018816.1

−2.81**

−3.27**

−1.16

8430408G22Rik

NM_145980.1

−2.77**

−2.12*

1.31

Acox2

NM_053115.1

−2.74**

−2.53**

1.08

Spp2

NM_029269.1

−2.74**

−2.91**

−1.06

Muc13

NM_010739.1

−2.03*

−2.09**

−1.03

Lcn2

NM_008491.1

−2.01*

−2.42**

−1.20

Slpi

NM_011414.2

−2.18**

−4.56**

−2.09

Aig1

NM_025446.1

−2.81**

−1.09

2.57

Wfdc2

NM_026323.2

−2.02*

−1.01

2.00

Snca

NM_009221.2

−2.86**

−1.56

1.84

Eraf

NM_133245.1

−2.84**

−1.61

1.77

Snca

NM_009221.2

−2.66**

−1.42

1.87

Slco2b1

NM_175316.3

−2.64**

−1.88

1.41

Hpx

NM_017371.1

−2.52*

−1.70

1.49

1810007E14Rik

NM_025308.1

−2.52**

−1.66

1.52

Slc4a1

NM_011403.1

−2.49**

−1.48

1.68

Alas2

NM_009653.1

−2.46**

−1.41

1.75

Ctsh

NM_007801.1

−2.43**

−1.97

1.24

Ttr

NM_013697.3

−2.34*

−1.65

1.42

Dnmt3l

NM_019448.2

−2.31**

−1.36

1.69

Abhd14b

NM_029631.2

−2.25*

−1.77

1.27

Cish

NM_009895.3

−2.22*

−1.99

1.12

Vdr

NM_009504.2

−2.22**

−1.89

1.17

Dnmt3l

NM_001081695.1

−2.21**

−1.40

1.58

Gstm1

NM_010358.4

−2.19*

−1.67

1.31

Magi1

NM_001029850.2

−2.18**

−1.21

1.80

Upk3b

NM_175309.3

−2.16*

−1.70

1.27

Clic6

NM_172469.3

−2.16*

−1.73

1.24

LOC100044204

XM_001471696.1

−2.14**

−1.88

1.14

Igfbp2

NM_008342.2

−2.12**

−1.65

1.29

Vdr

NM_009504.3

−2.65**

−2.19*

1.21

Itih3

NM_008407.1

−2.63**

−2.64*

−1.00

Apoa2

NM_013474.1

−2.59**

−2.77*

−1.07

Tfrc

NM_011638.3

−2.56**

−3.08**

−1.20

Kng1

NM_023125.2

−2.56**

−3.07*

−1.20

Fcgr3

NM_010188.4

−2.52**

−2.56*

−1.02

Dab2

NM_001008702.1

−2.48**

−2.34*

1.06

Gldc

NM_138595.1

−2.47*

−2.66**

−1.08

Serpina1b

NM_009244.4

−2.45**

−2.80**

−1.14

Tfrc

NM_011638.3

−2.44**

−2.87**

−1.18

Cfi

NM_007686.2

−2.43**

−2.20*

1.10

Ltf

NM_008522.3

−2.40**

−2.30**

1.05

Gpc3

NM_016697.2

−2.38**

−2.50*

−1.05

Mgst1

NM_019946.3

−2.37**

−2.51*

−1.06

Fgg

NM_133862.1

−2.36**

−2.95**

−1.25

Nr1h4

NM_009108.1

−2.33**

−3.16*

−1.35

Kng1

NM_023125.2

−2.32**

−2.87**

−1.24

Slc7a9

NM_021291.1

−2.28*

−3.04*

−1.34

Slc7a9

NM_021291.1

−2.27**

−2.82*

−1.24

Irf6

NM_016851.2

−2.25**

−2.43*

−1.08

Trf

NM_133977.2

−2.19**

−2.37**

−1.08

Sema4a

NM_013658.2

−2.16*

−2.60*

−1.20

Serpina1b

NM_009244.4

−2.16**

−2.62**

−1.21

Gipc2

NM_016867.1

−2.15**

−2.56*

−1.19

Kng2

NM_201375.1

−2.15**

−2.59*

−1.20

Igfbp6

NM_008344.2

−2.06**

−3.64*

−1.76

Ostb

NM_178933.2

−2.08**

−1.83

1.14

Pmp22

NM_008885.2

−2.06*

−1.98

1.04

Fbp2

NM_007994.3

−3.62**

−2.27

1.59

Apoa4

NM_007468.2

−3.25**

−3.06

1.06

Bex2

NM_009749.1

−3.19**

−2.71

1.18

Eps8l3

NM_133867.1

−3.00**

−2.13

1.40

Slc23a3

NM_194333.3

−2.92**

−2.97

−1.02

Lbp

NM_008489.2

−2.89**

−2.39

1.21

Pdzk1ip1

NM_026018.2

−2.81**

−2.62

1.07

Upk3b

NM_175309.3

−2.78**

−2.27

1.23

Sepp1

NM_009155.3

−2.74**

−2.60

1.06

Cyp2c70

NM_145499.1

−2.65**

−2.28

1.16

Fmo1

NM_010231.2

−2.59**

−2.44

1.06

Upk3b

NM_175309.3

−2.43**

−2.05

1.19

Rnase4

NM_201239

−2.32**

−2.76

−1.19

Apoc1

NM_007469.3

−2.31*

−2.07

1.11

Apoc1

NM_007469.3

−2.30*

−2.07

1.11

Gpc3

NM_016697.2

−2.25*

−2.23

1.01

Timd2

NM_134249.3

−2.16*

−2.39

−1.11

Pcdh24

NM_001033364.2

−2.15**

−2.29

−1.07

Gldc

NM_138595.1

−2.12**

−2.18

−1.03

Bglap-rs1

NM_031368.3

−2.03*

−2.13

−1.05

Abcc10

NM_170680.2

−2.93**

1.01

2.96*

Prss22

NM_133731.1

−2.70**

−1.11

2.44*

  1. Significantly reduced in SCNT
  2. *p < 0.05; **p < 0.01