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Table 2 A summary of HMMER search results

From: Diversity of ABC transporter genes across the plant kingdom and their potential utility in biotechnology

E-value cutoff True positives False positives True negatives False negatives Specificity Sensitivity
3.10E-21 222 48 84,882 11 0.9994 0.9528
3.10E-18 230 52 84,870 3 0.9994 0.9871
2.10E-15 231 52 84,869 2 0.9994 0.9914
2.10E-13 232 55 84,865 1 0.9994 0.9957
2.10E-10 233 64 84,855 0 0.9992 1.0000
  1. Summary of sensitivity and specificity of 85,152 HMMER queries against pfam as a method for selecting an appropriate cutoff e-value for the identification of PF00005 (ABC transporter) domains