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Table 5 The oligonucleotides primers used in this work

From: Combinatorial metabolic engineering of industrial Gluconobacter oxydans DSM2343 for boosting 5-keto-D-gluconic acid accumulation

Primer

Sequence (5’ → 3’)

Usage

pr_PstI_F

AACTGCAGgtttatcggccgttgaatat

Amplify the par-rep gene

pr_SalI_R

ACGCGTCGACggtgtttaaacagtgttacggt

0169_SacI_F

ATAGAGCTCtgaaagcggctggcgcgt

Amplify the 5’-UTR of GOX0169 promoter

0169_XbaI_R

GCTCTAGAgcggaaggcgttataccctga

0264_SacI_F

ATAGAGCTCgttgcgcctgaatgagagg

Amplify the 5’-UTR of GOX0264 promoter

0264_XbaI_R

GCTCTAGAttcggtctccctcgccgtaa

0452_SacI_F

ATAGAGCTCggcttcgtggtgaacgcc

Amplify the 5’-UTR of GOX0452 promoter

0452_XbaI_R

GCTCTAGAtagtgacattccagcttggg

tufB_ SacI_F

ATAGAGCTCcgatggtaagaaatccactgc

Amplify the tufB promoter

tufB_ XbaI_R

ATATCTAGAccaaaaccccgctccacc

GFP_XbaI_F

ATATCTAGAatggtgagcaagggc

Amplify the gfp reported gene

GFP_HindIII_R

CCCAAGCTTctacttgtacagctc

SLDH_XbaI_F

GCTCTAGAggactttcagttctggaggctttcacca

Amplify the sldAB gene

SLDH_EcoRI_R

CGGAATTCtcccacccgaaaaatggaaaaaacg

ADD_0169_F

acactgtttaaacaccgtgaaagcggctggcgc

Amplify the fuse fragments

pQQ_Fuse0169_R

acatccgcgcggaaggcgttatac

pQQ_Fuse0169_F

ccttccgcgcggatgttcagg

tldD_FusepQQ_R

ccggctagaagatggcctctc

tldD_FusepQQ_F

gccatcttctagccggtctgttc

0169_FusetldD_R

ctttcaggatcttcttcatg

0169_FusetldD_F

tcgcgactgaaagcggctggc

ADD_0169_R

cggtacccggggatcctgcggaaggcgttatac

cyoBACD_XbaI_F

CGATTCTAGAactactgcaagccggaacgg

Amplify the terminal cytochrome bo 3 oxidase

cyoBACD_SacI_R

ACTGGAGCTCaagggctggcaggatttctc

RT16S_F

gcggttgttacagtcagatg

-

RT16S_R

gcctcagcgtcagtatcg

-

RTsldh_F

atcatgccgaccaagcgtggc

-

RTsldh_R

cgtcggcgaacgcggatcg

-

  1. aThe capital and underlined sequences indicate the restriction enzyme sites