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Fig. 3 | BMC Biotechnology

Fig. 3

From: Genomic variation and DNA repair associated with soybean transgenesis: a comparison to cultivars and mutagenized plants

Fig. 3

A novel deletion on chromosome 11 in transgenic plant WPT_389-2-2. a A plot of CGH data for the transgenic plant versus ‘Bert’ is shown, zoomed in on the chromosome 11 deletion seen in Fig. 1c. Probes are plotted as dots corresponding to the log2 ratio from the CGH array. Dark gray dots represent probes within significant SV segments that exceed the empirical threshold. Even with the extremely low detection threshold, part of this deletion could not be verified via CGH alone, necessitating visual inspection and sequencing of the deletion breakpoint. b Graphical interpretation of the hemizigous deletion found in WPT_389-2-2 is shown. c Sequence data from the breakpoint junction shows moderate homology on either end of the breakpoint

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