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Fig. 4 | BMC Biotechnology

Fig. 4

From: Defining the complementarities between antibodies and haptens to refine our understanding and aid the prediction of a successful binding interaction

Fig. 4

Structural, docking, and surface-mapped electrostatic potential of antibodies. The homology structures of the post-selection clones were determined by SWISS-MODEL workplace for clones a HSL1, b SQA A5, c POR B11, d COP H3. Docking analyses were conducted with AutoDock Vina 1.5.6. The structures were viewed by PyMOL 1.3 (academic version). Measurements of electrostatic energies were calculated using Python Molecule Viewer (PMV) Version 1.5.6. The produced energy was mapped with medium surface quality and at a 1 Å distance from the surface. The map color was coded as white: 0 kT/e, Blue: 10.2 kT/e, Red: −10.2 kT/e

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