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Table 2 Resequencing results of the BAC clones

From: A simple method for semi-random DNA amplicon fragmentation using the methylation-dependent restriction enzyme MspJI

   All reads 100,000 read subset
BAC name BAC length Total reads Aligned reads (%) Ratio of coverage (%) Average coverage depth (time) Aligned reads Ratio of coverage (%) Average coverage depth (time)
MXK3 81 kb 395,498 27,585 (7.0%) 99.6% 82.3 7086 98.6% 21.3
F20D21 143 kb 558,276 86,861 (15.6%) 99.8% 149.4 15382 99.2% 26.5
F20B17 90 kb 478,300 46,409 (9.7%) >99.9% 126.2 9173 99.9% 24.9
  1. Ratio of coverage denotes the value for specific nucleotides located on each clone. A subset of 100,000 reads was obtained using the Seqtk software.