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Table 1 Computational subtraction of 75-basepair sequence tags against A. thaliana transcriptome and genome

From: Characterization of unknown genetic modifications using high throughput sequencing and computational subtraction

  Starting pool of tags Transcriptome megablast Genome megablast
Sequenced tags 58,933 (100%) 5,727 (9.72%) 159 (0.27%)
pBI121 T DNA tags 147 (0.25%*) 146 (2.55%*) 146 (91.82%*)
Prokaryotic tags 1,000 (100%) 995 (99.5%) 995 (99.5%)
  1. * - percent of total remaining tags that match pBI121 T DNA
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