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Table 1 Computational subtraction of 75-basepair sequence tags against A. thaliana transcriptome and genome

From: Characterization of unknown genetic modifications using high throughput sequencing and computational subtraction

 

Starting pool of tags

Transcriptome megablast

Genome megablast

Sequenced tags

58,933 (100%)

5,727 (9.72%)

159 (0.27%)

pBI121 T DNA tags

147 (0.25%*)

146 (2.55%*)

146 (91.82%*)

Prokaryotic tags

1,000 (100%)

995 (99.5%)

995 (99.5%)

  1. * - percent of total remaining tags that match pBI121 T DNA