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Table 4 Localisation and evaluation of differences between 43RCA framework regions, and those coded by 43RCA most similar human germline genes

From: Isolation of a human-like antibody fragment (scFv) that neutralizes ricin biological activity

 

Total

Identical

Very similar

(+++)

Similar

(+-+), (++-), (+-+)

Dissimilar

(--+), (-+-), (+- -)

Very dissimilar

(- - -)

VH

      

FR1-IMGT

25

23

0

2

0

0

FR2-IMGT

17

14

0

1

0

2

FR3-IMGT

38

34

0

1

3

0

FR4-IMGT

11

9

0

1

0

1

FR-IMGT

91

80

0

5

3

3

V-KAPPA

      

FR1-IMGT

26

24

1

1

0

0

FR2-IMGT

17

15

0

0

2

0

FR3-IMGT

36

33

0

1

1

1

FR4-IMGT

10

10

0

0

0

0

FR-IMGT

89

82

1

2

3

1

All FR-IMGT VH and V-KAPPA

180

162

1

7

6

4

 

(%)

90%

0.56%

3.89%

3.33%

2.22%

  1. Differences between 43RCA VH and VL framework amino acids, and those coded by most similar human genes, are evaluated on a 5-level scale (from identical to very dissimilar, see text) and located in each framework region.