Detecting imbalanced expression of SNP alleles by minisequencing on microarrays

BMC Biotechnology

Table 1 SNP genotypes of the DNA samples used for preparing the dilution series for the quantification curves.

SNP^a	Sample 1	Sample 2	Allele range^b
rs4331 ACE	TT	CC	0–100% T
rs1042713 ADRB2	AA	GG	0–100% A
rs1042714 ADRB2	CC	CG	50–100% C
rs1042718 ADRB2	CC	CA	50–100% C
rs1042719 ADRB2	CG	GG	0–50% C
rs1799983 NOS3	CC	CA	50–100% C
rs5351 EDNRB	GA	AA	0–50% G
rs5925 LDLR	TT	CC	0–100% T
rs5930 LDLR	TC	CC	0–50% T
rs1433099 LDLR	TC	CC	0–50% T

^a SNP name consisting of dbSNP ID number and gene name acronym.
^b The percentages of the allele from Sample 1 in the dilution series with the 0–100% allele range were: 0%; 2.1%; 4.9%; 7.5%; 11.6%; 17.9%; 27.5%; 42.3%; 65%; 100%. The corresponding percentages in the 0–50% allele range were 0%; 1.0%; 2.5%; 3.8%; 5.8%; 8.9%; 13.7%; 21.1%; 32.5%; 50%, and in the 50–100% allele range they were 50%; 51.3%; 52.5%; 53.8%; 55.8%; 58.9%; 63.7%; 71.1%; 82.%; 100%.

ISSN: 1472-6750