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Table 1 Percent signal change due to nucleotide substitution.

From: Quantitative assessment of the use of modified nucleoside triphosphates in expression profiling: differential effects on signal intensities and impacts on expression ratios

  Relative percent change
Probe Name MeC MeU 1:1 DAP:A
AI936591 108 -38 27
AB029001 110 -7 112
U90544 113 -19 540
AA707570 115 -7 259
AK000445 116 22 23
AF054506 121 -36 47
AB007891 127 -16 117
D42045 138 62 35
AB006190 146 -28 481
AI935557 166 25 2
NM_006794 168 -20 1623
AB028946 168 -24 351
AK000601 179 51 451
AB020710 198 90 165
AK000527 230 -33 93
AI742085 246 5 41
AF017789 269 601 -44
AK001962 279 257 4
AF038661 291 -44 445
AB037797 301 295 279
AF035121 314 40 10
AF016369 332 324 149
AB034695 346 -22 363
U15932 377 66 43
AK001933 380 219 237
AJ223352 465 545 54
AF227899 559 106 603
AK000286 821 -57 922
AF052093 885 587 177
L77701 2356 1278 284
AL137493 4256 -37 2977
D86956 5999 2857 1367
  1. MeC and MeU substitution increases signal intensities for a small number of probes. Relative percent change was calculated by the equation: 100 * (modified sample signal - control sample signal) / control sample signal. Relative change for these probes due to 1:1 DAP:A substitution is also given as reference.