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Table 1 Organisms and accession numbers of the putative nitrilases mined from the GenBank database[2731]

From: Discovery and characterization of a highly efficient enantioselective mandelonitrile hydrolase from Burkholderia cenocepacia J2315 by phylogeny-based enzymatic substrate specificity prediction

Organism

GenBank Accession no.

Predicted function

Defined functionb

Identitya (%)

Reference

Bradyrhizobium japonicum USDA 110

NP_773042

 

nitrilase

100

[21]

Burkholderia xenovorans LB400

YP_559838

 

nitrilase

60

[22]

Pseudomonas fluorescens EBC191

AAW79573

 

nitrilase

60

[17]

Sphingomonas wittichii RW1

YP_001261492

unnamed protein product

 

58

This study

Bradyrhizobium sp. ORS 278

YP_001206496

aliphatic nitrilase

 

58

This study

Bradyrhizobium sp. BTAi1

YP_001240698

aliphatic nitrilase

 

57

This study

uncultured organism

AAR97509

 

nitrilase

56

[20]

Burkholderia cenocepacia J2315

YP_002231697

putative nitrilase

 

56

This study

Methylibium petroleiphilum PM1

YP_001020190

aliphatic nitrilase

 

55

This study

Nocardia farcinica IFM 10152

YP_119480

nitrilase

 

55

This study

Stappia aggregata IAM 12614

ZP_01549810

nitrilase

 

53

This study

Rhodococcus rhodochrous K22

Q02068

 

nitrilase

51

[27]

Rhodococcus rhodochrous J1

Q03217

 

nitrilase

50

[23]

Acidovorax facilis 72W

ABD98457

 

nitrilase

49

[25]

Alcaligenes faecalis JM3

P20960

 

nitrilase

47

[13]

Sphingomonas wittichii RW1

YP_001264656

unnamed protein product

 

46

This study

Neosartorya fischeri NRRL 181

XP_001261815

nitrilase, putative

 

45

This study

Aspergillus clavatus NRRL 1

XP_001276027

nitrilase, putative

 

41

This study

Aspergillus niger

ABX75546

 

nitrilase

38

[28]

Bordetella bronchiseptica RB50

NP_887662

unnamed protein product

 

37

This study

Arthrobacter aurescens TC1

YP_946154

nitrilase

 

36

This study

Bacillus pumilus ATCC 7061

ZP_03055417

nitrilase

 

36

This study

Rhodopseudomonas palustris CGA009

NP_949502

nitrilase

 

36

This study

Pseudomonas fluorescens Pf-5

YP_260565

carbon-nitrogen family hydrolase

 

36

This study

Arabidopsis thaliana

NP_190018

 

nitrilase

35

[29]

Burkholderia graminis C4D1M

ZP_02885032

nitrilase

 

35

This study

Bradyrhizobium japonicum USDA 110

NP_770037

 

nitrilase

35

[30]

Arabidopsis thaliana

NP_197622

 

nitrilase

35

[31]

Methylibium petroleiphilum PM1

YP_001022666

nitrilase

 

34

This study

Synechocystis sp. PCC 6803

NP_442646

 

nitrilase

34

[24]

Burkholderia phymatum STM815

YP_001861308

unnamed protein product

 

34

This study

Arabidopsis thaliana

NP_190016

 

nitrilase

34

[29]

Arabidopsis thaliana

NP_851011

 

nitrilase

34

[29]

Shewanella pealeana ATCC 700345

YP_001502716

nitrilase

 

33

This study

Burkholderia xenovorans LB400

YP_559598

nitrilase

 

32

This study

Roseobacter sp. GAI101

ZP_05099070

aliphatic nitrilase

 

32

This study

Burkholderia ambifaria AMMD

YP_772488

nitrilase/cyanide hydratase hydratase and apolipoprotein N-acyltransferase

 

31

This study

Pseudomonas fluorescens Pf-5

YP_260015

 

nitrilase

31

[26]

Zymomonas mobilis ZM4

YP_162942

unnamed protein product

 

30

This study

  1. a BLASTP was performed by comparing the amino acid sequence with that of the mandelonitrile hydrolase (bll6042, NP_773042) from Bradyrhizobium japonicum USDA 110.
  2. b The enzymes were experimentally characterized to harbor nitrilase activity.