Table 2 DNA sequences of the oligonucleotides used in padlocks
From: Comparison and transfer testing of multiplex ligation detection methods for GM plants
Name | Type | T1, 5' target (5'-3') | cZIP sequence (5'-3') | T2, 3' target (5'-3') | Size (nt) |
|---|---|---|---|---|---|
TC1507 | event | CGCGGTTTGTGATATCGTTAACCATTACATTGAGACGTCTAC | ATGATGTGCAAAGTGCCGTC | CTTTCGTTCTTGTGTTC | 126 |
pat | element | CAACCACAGACTTAAAACCTTGCGCCTCCATAGAC | ACGCTAATGACGGCAGTGCA | GGAAGGCCTATAACAG | 118 |
cry1F | element | GAAACGTGTAAGGGACAGGGAGATGTCTAACGGCAATC | ATTTGACGAACGTATGCCGC | ACAAACTCAGACAACAG | 122 |
cry1Ab | element | CAGGTTGGTGCACTTGGTGAGGGGGATCTGGGTGATTTGG | ACATCCTGGACACGAGTGAC | GGTGCCGCTGCC | 119 |
cp4-epsps | element | GGCCTTGCCCGTATTGATGACGTCCTCGCC | ATTAACTCGACTGCCGCGTG | CCCATGGCCTGCAT | 111 |
barstar | element | GCCTCCATTCCAAAACGAGCGGGTACTCCA | TCCTCTCGTTGGATGTGAGC | CTTGCTTTGTTCAAACT | 114 |
Bt11 | construct | ATCTTCGCTAGAGTAAGGGTTTCTTATATGCTCAACACATGAGCG | GAATGCGGTTCAACAGTCTT | GCGAGGTGAAGAGG | 126 |
maize (hmg) | species | CACACAAACGCACGCGTAAAACAATTAATCAGCACGAG | CTGCGGTGTCAGTGATCTCT | GCCTTGTCCTACAATC | 121 |
maize (zein) | Â | CTGTGGCATCATCACTGGCATCGT | GTACTACATTCGTGCGATGG | TTAGGCGTCATCAT | 124 |
rice | species | CCATTGCTGTCTCTGCAAGCTCACGCGC | ATGCAGCGTAGGTATCGACT | CGGCAGCAACTCTCA | 110 |