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Table 1 Differential gene-expression between monocytes from HIV-patients and healthy controls, compared to microarray and RT-qPCR results

From: Do-it-yourself: construction of a custom cDNA macroarray platform with high sensitivity and linear range

Gene OGS

Gene Entrez ID

MAS-macroarray

CL-HWG

RT-qPCR

  

p-value*

fold change

p-value*

fold change

fold change

CAPG

822

0.0375

-1.76

n.s.

1.09

-2.02

CCR1

1230

0.0240

2.16

n.s.

1.32

2.21

CDKN1A

1026

0.0012

1.91

0.0066

1.59

1.76

IL1F7

27178

0.0480

-1.58

n.s.

1.05

-2.12

NAMPT

10135

0.0381

2.34

0.0010

1.56

2.56

PDCD1LG2

80380

0.0087

-3.19

0.0065

1.68

-3.15

PTGER2

5732

0.0477

1.57

n.s.

1.22

1.85

STAT1

6772

0.0164

2.40

0.0004

1.52

2.25

YWHAZ

7534

0.0429

1.75

n.s.

1.06

1.51

  1. OGS: Official Gene Symbol, MAS: Macrophage Activation State, CL-HWG: CodeLink Human Whole Genome microarray. * Student's t-test.
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BMC Biotechnology

ISSN: 1472-6750

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