Yeast functional screen to identify genetic determinants capable of conferring abiotic stress tolerance in Jatropha curcas

Eswaran, Nalini; Parameswaran, Sriram; Sathram, Balaji; Anantharaman, Bhagyam; Kumar G, Raja Krishna; Tangirala, Sudhakar Johnson

doi:10.1186/1472-6750-10-23

Table 1 Annotation of 32 full length genes, derived from J. curcas, obtained from yeast functional genetic screen tolerant to abiotic stress*

From: Yeast functional screen to identify genetic determinants capable of conferring abiotic stress tolerance in Jatropha curcas

Sr. No.	Clone ID	GenBank Accession No.	Putative function of gene	Length of gene (bp)	References*
1.	JcRHDYT30	FJ489601	Allene oxide cyclase	777	Yamada et al. 2002 [28]
2.	JcRHDYT70	FJ489602	Thioredoxin H-type (TRX-h)	357	Hong et al. 2004 [25]; Serrato et al. 2004 [26]
3.	JcRHDYT63	FJ489603	Metallothionein	234	Jin et al. 2006 [24]
4.	JcRHDYT49	FJ489604	Heterotrophic ferredoxin	492	Sheokand and Brewin, 2003 [41]
5.	JcRHDYT91	FJ489605	Defensin	234	Zhang et al. 2008 [42]
6.	JcRHDYT95	FJ489606	Calmodulin-7 (CAM-7)	810	Pardo et al. 1998 [43]
7.	JcRHDYT29	FJ489607	Major allergen Pru ar1-like protein	495	Mbeguie et al. 1997 [30]
8.	JcRHDYT19	FJ489608	S18.A ribosomal protein	495	Williams et al. 2003 [27]
9.	JcRHDYT69	FJ489609	60S ribosomal protein L18a	537	Carroll et al. 2008 [44]
10.	JcRHDYT108	FJ489610	Protease inhibitor/seed storage/lipid transfer protein family	348	Choi et al. 2008 [45]
11.	JcRHDYT174	FJ489611	Unknown protein	195
12.	JcRHDYT231	FJ619041	Membrane protein -2	189
13.	JcRHDYT235	FJ619042	Late embryogenesis abundant protein 5 (LEA-5)	267	Hundertmark and Hincha, 2008 [29]
14.	JcRHDYT365	FJ619043	Cold-induced plasma membrane protein	174	Imai et al. 2005 [46]
15.	JcRHDYT392	FJ619044	Cytosolic ascorbate peroxidase -1 (Apx-1)	753	Badawi et al. 2004 [31]
16.	JcRHDYT619	FJ619045	Profilin-like protein	384	Ramachandran et al. 2000 [33]
17.	JcRHDYT618	FJ619046	Caffeoyl-CoA-O-methyltransferase (CCoAOMT)	741	Day et al. 2009 [47]
18.	JcRHDYT557	FJ619047	Eukaryotic translation initiation factor SUI1	381	Langland et al. 1996 [48]
19.	JcRHDYT401	FJ619048	Copper chaperone	282	Wintz and Vulpe, 2002 [32]
20.	JcRHDYT391	FJ619049	Ubiquitin conjugating enzyme 2 (JcE2)	447	Criqui et al. 2002 [49]
21.	JcRHDYT513	FJ619050	Mitochondrial ATP synthase 6 KD subunit (JcMtATP6)	171	Zhang et al. 2006 [17]
22.	JcRHDYT442	FJ619051	Ferritin-2, chloroplast precursor	771	Masuda et al. 2001 [50]
23.	JcRHDYT483	FJ619052	Annexin-like protein	945	Gidrol et al. 1996 [51]
24.	JcRHDYTC-4	FJ619053	Al-induced protein	711	Taylor et al. 1997 [52]
25.	JcRHDYT399	FJ619054	Avr9/cf-9 rapidly elicited (JcACRE) gene	231	Rowland et al. 2005 [53]
26.	JcRHDYT354	FJ619055	60S ribosomal protein L39	156	Carroll et al. 2008 [44]
27.	JcRHDYT370	FJ619056	Ribosomal protein L37	291	Carroll et al. 2008 [44]
28.	JcRHDYT381	FJ619057	Ribosomal protein L15	729	Carroll et al. 2008 [44]
29.	JcRHDYT413	FJ623457	40S ribosomal protein S15	456	Carroll et al. 2008 [44]
30.	JcRHDYT461	FJ623458	40S ribosomal S18	459	Van Lijsebetkens et al. 1994 [54]
31.	JcRHDYT512	FJ623459	Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor	306	Lin et al. 2005 [55]
32.	JcRHDYT591	FJ623460	Low-molecular weight cysteine rich 69	234	Vanoosthuyse et al. 2001 [56]

*Sequence ortholog with previous reports to abiotic stress tolerance have been marked with references in the table.

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